Miyakogusa Predicted Gene

Lj2g3v0343900.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v0343900.1 tr|B9IDA9|B9IDA9_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_575848 PE=4
SV=1,69.09,0.00000000000003,CitMHS,Citrate transporter-like domain;
ARSENITE TRANSPORT PROTEIN,NULL; SOLUTE CARRIER FAMILY 13
ME,CUFF.34502.1
         (1470 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP042610 homologue to UniRef100_A7QG37 Cluster: Chromos...   170   2e-41

>gnl|LJGI|BP042610 homologue to UniRef100_A7QG37 Cluster: Chromosome undetermined
            scaffold_91, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_91, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (4%)
          Length = 113

 Score =  170 bits (86), Expect = 2e-41
 Identities = 109/113 (96%), Gaps = 4/113 (3%)
 Strand = Plus / Minus

                                                                        
Query: 1324 gtcttatcaaatttggcttcgaatgttccaactgttttattgcttggagcaagagttgca 1383
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113  gtcttatcaaatttggcttcgaatgttccaactgttttattgcttggagcaagagttgca 54

                                                                 
Query: 1384 gcatc-agctgctacaatttcgaaagaa--gatg-agaaaaaggcatggctca 1432
            ||||| ||||||||||||||||||||||  |||| ||||||||||||||||||
Sbjct: 53   gcatcnagctgctacaatttcgaaagaanngatgaagaaaaaggcatggctca 1