Miyakogusa Predicted Gene
- Lj2g3v0342790.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0342790.1 Non Chatacterized Hit- tr|I1MPJ5|I1MPJ5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.22372
PE,65.22,0,coiled-coil,NULL; FAMILY NOT NAMED,NULL; seg,NULL;
GRAS,Transcription factor GRAS,CUFF.34501.1
(1962 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60472 weakly similar to UniRef100_A7QG52 Cluster: Chr... 1637 0.0
gnl|LJGI|TC59019 similar to UniRef100_Q9XE55 Cluster: Scarecrow-... 1261 0.0
gnl|LJGI|BP069160 similar to UniRef100_Q9XE55 Cluster: Scarecrow... 325 6e-88
gnl|LJGI|TC62918 258 1e-67
gnl|LJGI|TC60720 similar to UniRef100_A7QG52 Cluster: Chromosome... 170 2e-41
gnl|LJGI|TC60340 similar to UniRef100_P08154 Cluster: Early grow... 90 6e-17
gnl|LJGI|TC80778 similar to UniRef100_Q9XE55 Cluster: Scarecrow-... 80 6e-14
gnl|LJGI|DC594965 76 9e-13
gnl|LJGI|BW598537 homologue to UniRef100_A7PNC8 Cluster: Chromos... 72 1e-11
gnl|LJGI|TC81471 similar to UniRef100_Q75Z33 Cluster: NADH dehyd... 66 9e-10
>gnl|LJGI|TC60472 weakly similar to UniRef100_A7QG52 Cluster: Chromosome undetermined
scaffold_91, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_91, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(21%)
Length = 1313
Score = 1637 bits (826), Expect = 0.0
Identities = 836/838 (99%), Gaps = 1/838 (0%)
Strand = Plus / Plus
Query: 325 ttcacccataaccaatttctctctaaccttctccttcgttctgtgaagccaagaacaacc 384
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ttcacccataaccaatttctctctaaccttctccttcgttctgtgaagccaagaacaacc 536
Query: 385 atgtttcctcacatggatttttccgttccttctcaattgcaaaacccaaacaatttggcc 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 atgtttcctcacatggatttttccgttccttctcaattgcaaaacccaaacaatttggcc 596
Query: 445 ttccaaacgcagcgtttaggtgtgcctttgcttcatcaacttcgccctcaacccattaac 504
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 ttccaaacgcagcgtttaggtgtgcctttgcttcatcaacttcgccctcaacccattaac 656
Query: 505 ctcccggaccagaatttcccataccggaactccaatttgggtctgcaccgggttcagaat 564
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 657 ctcccggaccagaatttcccataccggaactccaatttgggtctgaaccgggttcagaat 716
Query: 565 cagagtcagaccgatgatgaaccggagaagaagatcatgaaccaccagcttctggagttg 624
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 cagagtcagaccgatgatgaaccggagaagaagatcatgaaccaccagcttctggagttg 776
Query: 625 gagaagcagcttctagaagacaacgacgaaggagaagaacctgatgctgcttctgtcatc 684
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 gagaagcagcttctagaagacaacgacgaaggagaagaacctgatgctgcttctgtcatc 836
Query: 685 acaaccagtgagtggtcagagacttatcagaatctcatcggtctagtttcgggttcaggt 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 acaaccagtgagtggtcagagacttatcagaatctcatcggtctagtttcgggttcaggt 896
Query: 745 tccgggtcgggtttgactcagaaacccgcttcgtcatctcctacttcctcaacgacgtcg 804
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 tccgggtcggg-ttgactcagaaacccgcttcgtcatctcctacttcctcaacgacgtcg 955
Query: 805 tctacctcttcctctgcggcttcacctgcctcggtgtgttccaaacagacgctgatggaa 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 956 tctacctcttcctctgcggcttcacctgcctcggtgtgttccaaacagacgctgatggaa 1015
Query: 865 gccgcatctgcaatcgctgaagggaaaaacgacgccgcgtcggagatcctaacccgtttg 924
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1016 gccgcatctgcaatcgctgaagggaaaaacgacgccgcgtcggagatcctaacccgtttg 1075
Query: 925 gttaacccgactgggaattcggatcagcggttaaccgattgcatggttttggctctgaaa 984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1076 gttaacccgactgggaattcggatcagcggttaaccgattgcatggttttggctctgaaa 1135
Query: 985 tcgcggatgagcgcggcggagaatcctcccccggtggcggagcttttcagcagggaacac 1044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1136 tcgcggatgagcgcggcggagaatcctcccccggtggcggagcttttcagcagggaacac 1195
Query: 1045 gccgagtcgactcagcttctgcttgagaactcgccttgcttcaaggttgggttaatggct 1104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1196 gccgagtcgactcagcttctgcttgagaactcgccttgcttcaaggttgggttaatggct 1255
Query: 1105 gcgaatctcgtgattcttgaagcggcatttgaggagaacgtgaatgggaaagggttct 1162
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1256 gcgaatctcgtgattcttgaagcggcatttgaggagaacgtgaatgggaaagggttct 1313
Score = 212 bits (107), Expect = 6e-54
Identities = 110/111 (99%)
Strand = Plus / Plus
Query: 150 tcatcaatcctctcccatatttctagatccttcatcccaattcattcaacgccaaacacc 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tcatcaatcctctcccatatttctagatccttcatcccaattcattcaacgccaaacacc 361
Query: 210 aacaataacaacaacaaccttcaccggtaaacgcaccttggctgaattcca 260
||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aacaacaacaacaacaaccttcaccggtaaacgcaccttggctgaattcca 412
Score = 115 bits (58), Expect = 1e-24
Identities = 58/58 (100%)
Strand = Plus / Plus
Query: 1 atgtcgtcgggtttcaccggcggcggtggtggtgcgccggagttcttcaccggcagat 58
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 atgtcgtcgggtttcaccggcggcggtggtggtgcgccggagttcttcaccggcagat 210
>gnl|LJGI|TC59019 similar to UniRef100_Q9XE55 Cluster: Scarecrow-like 8; n=2;
Arabidopsis thaliana|Rep: Scarecrow-like 8 - Arabidopsis
thaliana (Mouse-ear cress), partial (32%)
Length = 909
Score = 1261 bits (636), Expect = 0.0
Identities = 639/640 (99%)
Strand = Plus / Plus
Query: 1323 gagccggcaagcggagcggttgaggatcgggttcgagtttcgtgtggtgtctgtgccgaa 1382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gagccggcaagcggagcggttgaggatcgggttcgagtttcgtgtggtgtctgtgccgaa 60
Query: 1383 taaactcgctgatttgactcgggagtcactcggttgcgactcggaggagacgctggtggt 1442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taaactcgctgatttgactcgggagtcactcggttgcgactcggaggagacgctggtggt 120
Query: 1443 gaacctcgcgttcaagctgaaccgcatccctgatgagagcgtttcaacggagaatccacg 1502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaacctcgcgttcaagctgaaccgcatccctgatgagagcgtttcaacggagaatccacg 180
Query: 1503 tgacgagcttttaaggcgcgtgaagaagctcgccccgcgcgtggtgactgttttggagca 1562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgacgagcttttaaggcgcgtgaagaagctcgccccgcgcgtggtgactgttttggagca 240
Query: 1563 ggaggtaaacgccaatacggcgccgtttttggcgcgcgtggctgagtcatggtcctacta 1622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ggaggtaaacgccaatacggcgccgtttttggcgcgcgtggctgagtcatggtcctacta 300
Query: 1623 tagtgccctgttcgactcggtcgagtcagcaatggggaaggaaaacccggaccgagtcaa 1682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tagtgccctgttcgactcggtcgagtcagcaatggggaaggaaaacccggaccgagtcaa 360
Query: 1683 ggtggaggagggactgagccggaagctatgcaactcggtggcttgcgaggggagggaccg 1742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ggtggaggagggactgagccggaagctatgcaactcggtggcttgcgaggggagggaccg 420
Query: 1743 cgtggagcggtgcgaggtgttcgggaaatggcgcgcgcgaatgagcatggcgggggtcca 1802
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 421 cgtggagcggtgcgaggtgttcgggaaatggcgcgcgcgaatgagcatggcggggttcca 480
Query: 1803 gctgaaaccgctgagtcaaaacctggctgagtcgattaattcgcgactcgccgccgggaa 1862
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gctgaaaccgctgagtcaaaacctggctgagtcgattaattcgcgactcgccgccgggaa 540
Query: 1863 caaccgagtcaacccgggactcaccgtgaaagaagagaacggcgggatatgctttggttg 1922
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 caaccgagtcaacccgggactcaccgtgaaagaagagaacggcgggatatgctttggttg 600
Query: 1923 gatgggaaggacactcaccgtcgcatctgcttggcgttaa 1962
||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gatgggaaggacactcaccgtcgcatctgcttggcgttaa 640
>gnl|LJGI|BP069160 similar to UniRef100_Q9XE55 Cluster: Scarecrow-like 8; n=2;
Arabidopsis thaliana|Rep: Scarecrow-like 8 - Arabidopsis
thaliana (Mouse-ear cress), partial (9%)
Length = 452
Score = 325 bits (164), Expect = 6e-88
Identities = 201/212 (94%), Gaps = 1/212 (0%)
Strand = Plus / Minus
Query: 1748 agcggtgcgaggtgttcgggaaatggcgcgcgcgaatgagcatggcgggggtccagctga 1807
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 452 agcggtgcgaggtgttcgggaaatggcgcgcgcgaatgagcatggcgggggtcccgctga 393
Query: 1808 aaccgctgagtcaaaacctggctgagtcgattaattcgcgactcgccgccgggaacaacc 1867
|||||||||||| |||||||||||||||||||||||||||||||||| ||||| || |||
Sbjct: 392 aaccgctgagtccaaacctggctgagtcgattaattcgcgactcgcccccggggaccacc 333
Query: 1868 gagtcaacccgggactcaccgtgaaagaagagaacggcgggatatgctttggttggatgg 1927
||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 332 gagtccacccgggactcgccctgaaagaagagaacggcgggatatgctttggttggatgg 273
Query: 1928 ga-aggacactcaccgtcgcatctgcttggcg 1958
|| |||||||||||| |||||| |||||||||
Sbjct: 272 gagaggacactcaccctcgcatttgcttggcg 241
>gnl|LJGI|TC62918
Length = 816
Score = 258 bits (130), Expect = 1e-67
Identities = 162/172 (94%), Gaps = 3/172 (1%)
Strand = Plus / Minus
Query: 335 accaatttctctctaaccttctccttcgttctgtgaagccaagaacaaccatgtttcctc 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 accaatttctctctaaccttctccttcgttctgtgaagccaagaacaaccatgtttcctc 528
Query: 395 acatggatttttccgttccttctcaattgcaaaacccaaacaatttggccttccaaacgc 454
||||||||||||| |||| |||||||||||||||||||||||||||||||||||| ||
Sbjct: 527 acatggatttttctgttc---ctcaattgcaaaacccaaacaatttggccttccaaatgc 471
Query: 455 agcgtttaggtgtgcctttgcttcatcaacttcgccctcaacccattaacct 506
||||||| ||||||||||||| |||||| ||||||| ||||||||||||||
Sbjct: 470 agcgttttggtgtgcctttgcgtcatcatcttcgcctacaacccattaacct 419
>gnl|LJGI|TC60720 similar to UniRef100_A7QG52 Cluster: Chromosome undetermined
scaffold_91, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_91, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(36%)
Length = 1121
Score = 170 bits (86), Expect = 2e-41
Identities = 329/410 (80%)
Strand = Plus / Plus
Query: 1384 aaactcgctgatttgactcgggagtcactcggttgcgactcggaggagacgctggtggtg 1443
|||||||| || ||||| |||||| ||||||||||||| |||| |||||||||| |||
Sbjct: 317 aaactcgccgagttgacccgggaggcactcggttgcgaaccggacgagacgctggctgtg 376
Query: 1444 aacctcgcgttcaagctgaaccgcatccctgatgagagcgtttcaacggagaatccacgt 1503
||| ||||||||||||| | | || || || |||||||| || ||||||||||| ||
Sbjct: 377 aacttcgcgttcaagcttttcagaatgcccgacgagagcgtgtcgacggagaatccccgc 436
Query: 1504 gacgagcttttaaggcgcgtgaagaagctcgccccgcgcgtggtgactgttttggagcag 1563
||||||||| | ||||||||||| ||| ||||||||||||| ||| | ||||||||
Sbjct: 437 gacgagcttctgcggcgcgtgaaggcgctatccccgcgcgtggttactctggtggagcag 496
Query: 1564 gaggtaaacgccaatacggcgccgtttttggcgcgcgtggctgagtcatggtcctactat 1623
||| | ||| | ||||||||||||||| || |||||||| ||||||| || || |||||
Sbjct: 497 gagctgaacactaatacggcgccgtttgtgccgcgcgtgactgagtcgtgctcttactac 556
Query: 1624 agtgccctgttcgactcggtcgagtcagcaatggggaaggaaaacccggaccgagtcaag 1683
|| || |||| ||||| | ||||| | ||| | || | | ||| || || |||
Sbjct: 557 agcgcgttgtttgactctattgagtccacggtggcgcgtgagagcttggagcgtgtgaag 616
Query: 1684 gtggaggagggactgagccggaagctatgcaactcggtggcttgcgaggggagggaccgc 1743
| ||| | |||||||| |||||| | | |||||||||||||| || |||||||| |||
Sbjct: 617 atcgagcaaggactgagtcggaaggtggggaactcggtggcttgtgaagggagggatcgc 676
Query: 1744 gtggagcggtgcgaggtgttcgggaaatggcgcgcgcgaatgagcatggc 1793
||||||||||| |||||||| ||||||||||||||||| |||||||||||
Sbjct: 677 gtggagcggtgtgaggtgtttgggaaatggcgcgcgcgtatgagcatggc 726
Score = 79.8 bits (40), Expect = 6e-14
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 1883 tcaccgtgaaagaagagaacggcgggatatgctttggttggatgggaaggacactcaccg 1942
|||| ||||| ||||||||||| ||||| |||| ||| ||| |||| || || |||||||
Sbjct: 801 tcacggtgaaggaagagaacggtgggatttgctgtgggtgggtggggagaactctcaccg 860
Query: 1943 tcgcatctgcttggcgttaa 1962
||||||||||||||||||||
Sbjct: 861 tcgcatctgcttggcgttaa 880
>gnl|LJGI|TC60340 similar to UniRef100_P08154 Cluster: Early growth response protein
1; n=2; Rattus norvegicus|Rep: Early growth response
protein 1 - Rattus norvegicus (Rat), partial (5%)
Length = 771
Score = 89.7 bits (45), Expect = 6e-17
Identities = 96/110 (87%), Gaps = 6/110 (5%)
Strand = Plus / Minus
Query: 377 gaacaaccatgtttcctcacatggatttttccgttccttctcaattgcaaaacccaaaca 436
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 541 gaacaaccatgtttcctcacatggatttttt--ttcct---caattgcaaaacccaaaca 487
Query: 437 atttggccttccaaacgcagcgtttaggtgtgcctttgcttcatcaactt 486
||| ||||||||| |||| |||||||| | |||||||||||||||||
Sbjct: 486 ttttt-ccttccaaatgcagactttaggtgagtctttgcttcatcaactt 438
Score = 73.8 bits (37), Expect = 4e-12
Identities = 58/65 (89%)
Strand = Plus / Minus
Query: 1384 aaactcgctgatttgactcgggagtcactcggttgcgactcggaggagacgctggtggtg 1443
|||||||| ||||||||||| ||||| || ||||||||||||||||| || ||||||||
Sbjct: 408 aaactcgccgatttgactcgcgagtcgctgggttgcgactcggaggaaacattggtggtg 349
Query: 1444 aacct 1448
|||||
Sbjct: 348 aacct 344
>gnl|LJGI|TC80778 similar to UniRef100_Q9XE55 Cluster: Scarecrow-like 8; n=2;
Arabidopsis thaliana|Rep: Scarecrow-like 8 - Arabidopsis
thaliana (Mouse-ear cress), partial (4%)
Length = 420
Score = 79.8 bits (40), Expect = 6e-14
Identities = 70/80 (87%)
Strand = Plus / Plus
Query: 1883 tcaccgtgaaagaagagaacggcgggatatgctttggttggatgggaaggacactcaccg 1942
|||| ||||| ||||||||||| ||||| |||| ||| ||| |||| || || |||||||
Sbjct: 21 tcacggtgaaggaagagaacggtgggatttgctgtgggtgggtggggagaactctcaccg 80
Query: 1943 tcgcatctgcttggcgttaa 1962
||||||||||||||||||||
Sbjct: 81 tcgcatctgcttggcgttaa 100
>gnl|LJGI|DC594965
Length = 152
Score = 75.8 bits (38), Expect = 9e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 10 ggtttcaccggcggcggtggtggtgcgccggagttcttcaccggca 55
|||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 61 ggtttcaccggcggcggtggtggtgcccccgagttcttcaccggca 106
>gnl|LJGI|BW598537 homologue to UniRef100_A7PNC8 Cluster: Chromosome chr1 scaffold_22,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_22, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 488
Score = 71.9 bits (36), Expect = 1e-11
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 331 cataaccaatttctctctaaccttctccttcgttctgtga 370
||||||||||||||||||||||||||||||| ||||||||
Sbjct: 418 cataaccaatttctctctaaccttctccttcattctgtga 457
>gnl|LJGI|TC81471 similar to UniRef100_Q75Z33 Cluster: NADH dehydrogenase subunit 4L;
n=1; Euhadra congenita congenita|Rep: NADH dehydrogenase
subunit 4L - Euhadra congenita congenita, partial (17%)
Length = 548
Score = 65.9 bits (33), Expect = 9e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 1384 aaactcgctgatttgactcgggagtcactcggttgcgactcggaggagacgctggtggtg 1443
|||||||| ||||||||||| |||| || | |||||||||| |||| ||||||||||||
Sbjct: 320 aaactcgccgatttgactcgcaagtcgctggattgcgactcgcaggaaacgctggtggtg 379
Query: 1444 aacct 1448
|||||
Sbjct: 380 aacct 384
Score = 63.9 bits (32), Expect = 4e-09
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 462 aggtgtgcctttgcttcatcaacttcgccctcaacccattaacctccc 509
||||| || |||| |||||||||||||||| |||||||||||||||||
Sbjct: 233 aggtgagcatttgattcatcaacttcgcccccaacccattaacctccc 280