Miyakogusa Predicted Gene

Lj2g3v0308640.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v0308640.1 Non Chatacterized Hit- tr|C3Y5B1|C3Y5B1_BRAFL
Putative uncharacterized protein OS=Branchiostoma
flor,30.16,0.8,seg,NULL,TC69903.path2.1
         (297 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69903 weakly similar to UniRef100_A0G590 Cluster: ABC...   147   4e-35
gnl|LJGI|TC79802 similar to UniRef100_UPI0000502353 Cluster: Pro...    56   1e-07

>gnl|LJGI|TC69903 weakly similar to UniRef100_A0G590 Cluster: ABC transporter
           related; n=1; Burkholderia phymatum STM815|Rep: ABC
           transporter related - Burkholderia phymatum STM815,
           partial (9%)
          Length = 883

 Score =  147 bits (74), Expect = 4e-35
 Identities = 74/74 (100%)
 Strand = Plus / Minus

                                                                       
Query: 147 catcagaattcagaaacaggggtggacaattaatgatcggcaacttcagatcaaggcaat 206
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 catcagaattcagaaacaggggtggacaattaatgatcggcaacttcagatcaaggcaat 249

                         
Query: 207 aaactacagatcaa 220
           ||||||||||||||
Sbjct: 248 aaactacagatcaa 235



 Score = 99.6 bits (50), Expect = 9e-21
 Identities = 50/50 (100%)
 Strand = Plus / Minus

                                                             
Query: 1   atgtcactctcatgtaaaacccaatctcatttcagtacaatttcttatgc 50
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 atgtcactctcatgtaaaacccaatctcatttcagtacaatttcttatgc 405


>gnl|LJGI|TC79802 similar to UniRef100_UPI0000502353 Cluster: Protein NDRG4 (Brain
           development-related molecule 1).; n=1; Rattus
           norvegicus|Rep: Protein NDRG4 (Brain development-related
           molecule 1). - Rattus norvegicus, partial (4%)
          Length = 474

 Score = 56.0 bits (28), Expect = 1e-07
 Identities = 28/28 (100%)
 Strand = Plus / Minus

                                       
Query: 193 cagatcaaggcaataaactacagatcaa 220
           ||||||||||||||||||||||||||||
Sbjct: 232 cagatcaaggcaataaactacagatcaa 205