Miyakogusa Predicted Gene

Lj2g3v0286930.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v0286930.1 tr|B9ID70|B9ID70_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_808241 PE=4
SV=1,48.05,0.00000000003, ,CUFF.34496.1
         (328 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP041660 UniRef100_Q87JD1 Cluster: UPF0251 protein VPA0...   650   0.0  

>gnl|LJGI|BP041660 UniRef100_Q87JD1 Cluster: UPF0251 protein VPA0321; n=2; Vibrio
           parahaemolyticus|Rep: UPF0251 protein VPA0321 - Vibrio
           parahaemolyticus, partial (11%)
          Length = 506

 Score =  650 bits (328), Expect = 0.0
 Identities = 328/328 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   atggctgaacctgatctggatactgcagatttttacctatcacatgacttagaacactgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 atggctgaacctgatctggatactgcagatttttacctatcacatgacttagaacactgt 351

                                                                       
Query: 61  gaattatcagttcagaatatcagcaacaaatctagcaatgaagctgtttccagtattaat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 gaattatcagttcagaatatcagcaacaaatctagcaatgaagctgtttccagtattaat 291

                                                                       
Query: 121 aaaagtgagatcatagatcttctcagcccttctccccctaaggctaagcaatcatcccta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 aaaagtgagatcatagatcttctcagcccttctccccctaaggctaagcaatcatcccta 231

                                                                       
Query: 181 acctccttaaaatgtgaacagtcaagtgacaaacgtatggaagtgattaacttgagtgat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 230 acctccttaaaatgtgaacagtcaagtgacaaacgtatggaagtgattaacttgagtgat 171

                                                                       
Query: 241 tcagagaatgatatgtcacctgaacacaaggagaaagcaaaagagctgagattgttctta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 tcagagaatgatatgtcacctgaacacaaggagaaagcaaaagagctgagattgttctta 111

                                       
Query: 301 gcaagtattagaaatgaaatccattgaa 328
           ||||||||||||||||||||||||||||
Sbjct: 110 gcaagtattagaaatgaaatccattgaa 83