Miyakogusa Predicted Gene
- Lj2g3v0276790.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0276790.1 tr|G7KLK7|G7KLK7_MEDTR RING-H2 finger protein
ATL3B OS=Medicago truncatula GN=MTR_6g055030 PE=4
SV=1,57.98,0,RING/U-box,NULL; Ring finger,Zinc finger, RING-type; no
description,Zinc finger, RING/FYVE/PHD-type;,CUFF.34459.1
(987 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73493 similar to UniRef100_Q8RXX9 Cluster: RING-H2 fi... 1949 0.0
gnl|LJGI|AV420654 357 8e-98
>gnl|LJGI|TC73493 similar to UniRef100_Q8RXX9 Cluster: RING-H2 finger protein ATL3B
precursor; n=2; Arabidopsis thaliana|Rep: RING-H2 finger
protein ATL3B precursor - Arabidopsis thaliana (Mouse-ear
cress), partial (24%)
Length = 1536
Score = 1949 bits (983), Expect = 0.0
Identities = 986/987 (99%)
Strand = Plus / Plus
Query: 1 atgtttgagtttcaacccaattacttcttcttcacttccttcccataccttcaaatcctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 atgtttgagtttcaacccaattacttcttcttcacttccttcccataccttcaaatcctc 239
Query: 61 ctattcctacaccatgttgatgcacaagcatccatggagccagtacccacatacatcact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 ctattcctacaccatgttgatgcacaagcatccatggagccagtacccacatacatcact 299
Query: 121 gaacataactgggagccttctattgcaatcacagtaggagccatcctctgcgcccttctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 gaacataactgggagccttctattgcaatcacagtaggagccatcctctgcgcccttctc 359
Query: 181 ttcatgggaatcattgcaatctacttccgcaattgcgccgagtcacgattcctcatggct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ttcatgggaatcattgcaatctacttccgcaattgcgccgagtcacgattcctcatggct 419
Query: 241 caaaccaacgcactagctaacaggtcatgttcctgttcacaaggcatcaacaaggacctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 caaaccaacgcactagctaacaggtcatgttcctgttcacaaggcatcaacaaggacctc 479
Query: 301 ctcagcacgttcccaaccatattctactacaccatcaaggacctcaaaaccggtaaagga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 ctcagcacgttcccaaccatattctactacaccatcaaggacctcaaaaccggtaaagga 539
Query: 361 tcgctcgaatgcgcggtctgcttgacggatttcaaagacgatgacacgctcaggttgctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tcgctcgaatgcgcggtctgcttgacggatttcaaagacgatgacacgctcaggttgctg 599
Query: 421 cccaaatgcagccatgttttccaccctcaatgcattgattcatggctagcttctcatgtg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 cccaaatgcagccatgttttccaccctcaatgcattgattcatggctagcttctcatgtg 659
Query: 481 acatgccctgtttgccgtgcaaatcttaaccaagatgcttgccaagttgccataactgtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 acatgccctgtttgccgtgcaaatcttaaccaagatgcttgccaagttgccataactgtg 719
Query: 541 ccaacccatttgagcaatgatcaaatgggtgccgaagctgcagaaaacagagctgaaact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 ccaacccatttgagcaatgatcaaatgggtgccgaagctgcagaaaacagagctgaaact 779
Query: 601 catggagatgaagggcaccaagtggagccaaatccaaacccaaaaccagttccagttgtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 catggagatgaagggcaccaagtggagccaaatccaaacccaaaaccagttccagttgtt 839
Query: 661 cataacatgaaagcaactgaggagggtaatagtgatgatggggttgcgtcaaaaccgaaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 cataacatgaaagcaactgaggagggtaatagtgatgatggggttgcgtcaaaaccgaaa 899
Query: 721 cttttgaggtcaaattcaacgggtcatttgcaagttgagccagtgaagtgtgtagagaga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 cttttgaggtcaaattcaacgggtcatttgcaagttgagccagtgaagtgtgtagagaga 959
Query: 781 tacacactgaggttaccagaggatgtgaggaggtacattctggtgaaccatgacaaaagg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 tacacactgaggttaccagaggatgtgaggaggtacattctggtgaaccatgacaaaagg 1019
Query: 841 tttcagcgttcagctagctgctacaacagcaatatcaacatcaacaacaatgaagggagc 900
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1020 tttcagcgttcagctagctgctacaacagcaatatcaacatcaacaaccatgaagggagc 1079
Query: 901 aatgttgggaagagtgtcaatggcgaagagaggatggagcggtgggtgatttgcacgccg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1080 aatgttgggaagagtgtcaatggcgaagagaggatggagcggtgggtgatttgcacgccg 1139
Query: 961 ccatttgttgcgtcgcgccgtggttga 987
|||||||||||||||||||||||||||
Sbjct: 1140 ccatttgttgcgtcgcgccgtggttga 1166
>gnl|LJGI|AV420654
Length = 413
Score = 357 bits (180), Expect = 8e-98
Identities = 180/180 (100%)
Strand = Plus / Plus
Query: 172 gcccttctcttcatgggaatcattgcaatctacttccgcaattgcgccgagtcacgattc 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 gcccttctcttcatgggaatcattgcaatctacttccgcaattgcgccgagtcacgattc 293
Query: 232 ctcatggctcaaaccaacgcactagctaacaggtcatgttcctgttcacaaggcatcaac 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 ctcatggctcaaaccaacgcactagctaacaggtcatgttcctgttcacaaggcatcaac 353
Query: 292 aaggacctcctcagcacgttcccaaccatattctactacaccatcaaggacctcaaaacc 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 aaggacctcctcagcacgttcccaaccatattctactacaccatcaaggacctcaaaacc 413