Miyakogusa Predicted Gene

Lj2g3v0264290.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v0264290.1 CUFF.39878.1
         (327 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67281 similar to UniRef100_A1A5R6 Cluster: LOC681092 ...   250   5e-66

>gnl|LJGI|TC67281 similar to UniRef100_A1A5R6 Cluster: LOC681092 protein; n=1; Rattus
           norvegicus|Rep: LOC681092 protein - Rattus norvegicus
           (Rat), partial (4%)
          Length = 771

 Score =  250 bits (126), Expect = 5e-66
 Identities = 133/134 (99%), Gaps = 1/134 (0%)
 Strand = Plus / Plus

                                                                       
Query: 195 agaaatggtaatggaaggttttc-aagaagtctgtcaagcgcaccatatcaatggaactg 253
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1   agaaatggtaatggaaggttttccaagaagtctgtcaagcgcaccatatcaatggaactg 60

                                                                       
Query: 254 ttagggtgcactacacctacattaatggtagccgattcaacattcggattttctatgatg 313
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ttagggtgcactacacctacattaatggtagccgattcaacattcggattttctatgatg 120

                         
Query: 314 agtacacgaggtag 327
           ||||||||||||||
Sbjct: 121 agtacacgaggtag 134