Miyakogusa Predicted Gene
- Lj2g3v0227090.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0227090.1 tr|C1DYP2|C1DYP2_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17) GN=MICPUN_55874
,49.07,5e-19,Pam16,Protein Transporter, Pam16; MITOCHONDRIA ASSOCIATED
GRANULOCYTE MACROPHAGE CSF SIGNALING MOLEC,CUFF.34392.1
(348 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63953 digalactosyldiacylglycerol synthase 1 [Lotus co... 690 0.0
gnl|LJGI|FS335604 weakly similar to UniRef100_A7PHR7 Cluster: Ch... 278 2e-74
gnl|LJGI|AU088811 weakly similar to UniRef100_A9S3Z5 Cluster: Pr... 196 6e-50
gnl|LJGI|DC598845 similar to UniRef100_A9RT24 Cluster: Predicted... 180 4e-45
gnl|LJGI|BP076843 similar to UniRef100_A1TIY6 Cluster: Integral ... 84 7e-16
>gnl|LJGI|TC63953 digalactosyldiacylglycerol synthase 1 [Lotus corniculatus var.
japonicus]
Length = 815
Score = 690 bits (348), Expect = 0.0
Identities = 348/348 (100%)
Strand = Plus / Plus
Query: 1 atggcttcaaagattcttgctaacttgattgtgatgggtgggggaatcttggttagagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 atggcttcaaagattcttgctaacttgattgtgatgggtgggggaatcttggttagagca 321
Query: 61 gttgctcaggcatatcgtcaagcacttaacaatgcggcgaaaaatggtgttgcccaagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gttgctcaggcatatcgtcaagcacttaacaatgcggcgaaaaatggtgttgcccaagag 381
Query: 121 acaatacaaaacactgtccgccgagttagcaaagtgatgacagagcaagaggctcgccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 acaatacaaaacactgtccgccgagttagcaaagtgatgacagagcaagaggctcgccag 441
Query: 181 attcttggtgttgctgaggaaactccctgggaagagattctgaagaaatatgacagattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 attcttggtgttgctgaggaaactccctgggaagagattctgaagaaatatgacagattg 501
Query: 241 tttgagaataattccaagaatgggagtttttacctccagtccaaagtccatcgagctaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tttgagaataattccaagaatgggagtttttacctccagtccaaagtccatcgagctaag 561
Query: 301 gaatgtctagaggcagtccacggcaagagtgagggtacccctagttga 348
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gaatgtctagaggcagtccacggcaagagtgagggtacccctagttga 609
>gnl|LJGI|FS335604 weakly similar to UniRef100_A7PHR7 Cluster: Chromosome chr17
scaffold_16, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (30%)
Length = 640
Score = 278 bits (140), Expect = 2e-74
Identities = 275/320 (85%)
Strand = Plus / Plus
Query: 1 atggcttcaaagattcttgctaacttgattgtgatgggtgggggaatcttggttagagca 60
|||||| ||| ||||||||||||||||||||| |||||||||||||| || | || ||||
Sbjct: 108 atggctacaaggattcttgctaacttgattgttatgggtgggggaatgttcgctaaagca 167
Query: 61 gttgctcaggcatatcgtcaagcacttaacaatgcggcgaaaaatggtgttgcccaagag 120
|||| | ||||||||| | |||||||| || || ||||||||||||||||||||
Sbjct: 168 gttgttaaggcatatcatgaagcacttgctaaggccttacaaaatggtgttgcccaagag 227
Query: 121 acaatacaaaacactgtccgccgagttagcaaagtgatgacagagcaagaggctcgccag 180
||| ||||||| ||||||||| ||| ||| ||| |||||||||||||||||||||| |||
Sbjct: 228 acattacaaaatactgtccgcggagctagaaaaatgatgacagagcaagaggctcggcag 287
Query: 181 attcttggtgttgctgaggaaactccctgggaagagattctgaagaaatatgacagattg 240
|||||||||||| |||||| ||||||||||| |||||||| |||||||||||| |||
Sbjct: 288 attcttggtgttactgagggaactccctggggggagattctccagaaatatgacaatttg 347
Query: 241 tttgagaataattccaagaatgggagtttttacctccagtccaaagtccatcgagctaag 300
|||||||| |||||| | || |||||||||||||||||||| ||||| || || ||||||
Sbjct: 348 tttgagaaaaattccgaaaaagggagtttttacctccagtctaaagttcaccgggctaag 407
Query: 301 gaatgtctagaggcagtcca 320
|||||||| ||||| |||||
Sbjct: 408 gaatgtctggaggctgtcca 427
>gnl|LJGI|AU088811 weakly similar to UniRef100_A9S3Z5 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(23%)
Length = 405
Score = 196 bits (99), Expect = 6e-50
Identities = 113/117 (96%), Gaps = 1/117 (0%)
Strand = Plus / Plus
Query: 1 atggcttcaaagattcttgctaacttgattgtgatgggtgggggaatcttggttagagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 212 atggcttcaaagattcttgctaacttgattgtgatgggtgggggaatcttggttanagca 271
Query: 61 gttgctcaggcatatcgtcaagcacttaacaatgcggcgaaaaatggtgttgcccaa 117
||||||||||||||||||| | |||||||||||||||| ||||||||||||||||||
Sbjct: 272 gttgctcaggcatatcgtc-ancacttaacaatgcggcaaaaaatggtgttgcccaa 327
>gnl|LJGI|DC598845 similar to UniRef100_A9RT24 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(24%)
Length = 576
Score = 180 bits (91), Expect = 4e-45
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 1 atggcttcaaagattcttgctaacttgattgtgatgggtgggggaatcttggttagagca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 atggcttcaaagattcttgctaacttgattgtgatgggtgggggaatcttggttagagca 267
Query: 61 gttgctcaggcatatcgtcaagcacttaaca 91
|||||||||||||||||||||||||||||||
Sbjct: 268 gttgctcaggcatatcgtcaagcacttaaca 298
>gnl|LJGI|BP076843 similar to UniRef100_A1TIY6 Cluster: Integral membrane sensor
signal transduction histidine kinase precursor; n=1;
Acidovorax, partial (3%)
Length = 158
Score = 83.8 bits (42), Expect = 7e-16
Identities = 70/76 (92%), Gaps = 5/76 (6%)
Strand = Plus / Minus
Query: 92 atgcggcgaaaaatggtgttgcccaagagacaatacaaaacactgtccgccgagttagca 151
|||||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 82 atgcggcgaaaaatggtgttgcccaagagaca-tacaac---ctgtccgccgagttagc- 28
Query: 152 aagtgatgacagagca 167
||||||||||||||||
Sbjct: 27 aagtgatgacagagca 12