Miyakogusa Predicted Gene
- Lj2g3v0216910.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0216910.1 Non Chatacterized Hit- tr|I1MNY2|I1MNY2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52620
PE,73.86,0,ZINC_FINGER_C2H2_2,Zinc finger, C2H2; zf-C2H2,Zinc finger,
C2H2; zinc finger,Zinc finger, C2H2-like;,CUFF.34369.1
(1534 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO026189 similar to UniRef100_UPI000065F9DE Cluster: GT... 410 e-113
gnl|LJGI|TC60062 homologue to UniRef100_A5A8C1 Cluster: C2-H2 zi... 394 e-109
gnl|LJGI|FS339239 similar to UniRef100_A5A8C1 Cluster: C2-H2 zin... 103 3e-21
>gnl|LJGI|GO026189 similar to UniRef100_UPI000065F9DE Cluster: GTP-binding protein 1
(G-protein 1) (GP-1) (GP1).; n=1; Takifugu rubripes|Rep:
GTP-binding, partial (2%)
Length = 211
Score = 410 bits (207), Expect = e-113
Identities = 210/211 (99%)
Strand = Plus / Plus
Query: 522 ggttcggcagacccttataaatggtaatcctttggtgggacagcttggccaactttgtgg 581
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggttcggcagacccttataaatggtaatcctttggtgggacagcttggccaactttgtgg 60
Query: 582 aattgctgttccttccggatcaggtccaagtagcagctgtattcaaccacaaaataataa 641
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aattgctgttccttccggatcaggtccaagtagcagctgtattcaaccacaaaataataa 120
Query: 642 cggaaataaactgtctgatcaatccatgcagaatgatctacctagtaatcgcgaaatgga 701
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cggaaataaactgtctgatcaatccatgcagaatgatctacctagtaatcgcgaaatgga 180
Query: 702 acaaaactacatggaagaacatgaatataaa 732
||||||||||||||||||||||| |||||||
Sbjct: 181 acaaaactacatggaagaacatggatataaa 211
>gnl|LJGI|TC60062 homologue to UniRef100_A5A8C1 Cluster: C2-H2 zinc finger protein;
n=1; Arabidopsis thaliana|Rep: C2-H2 zinc finger protein
- Arabidopsis thaliana (Mouse-ear cress), partial (27%)
Length = 884
Score = 394 bits (199), Expect = e-109
Identities = 361/415 (86%)
Strand = Plus / Plus
Query: 851 tcaagagggatgcgaatcttcgaatgcacatgagaggccacggtgacgagtacaaaaccc 910
|||||||||| |||||||| |||||||||||| ||||||||||||| ||||| ||||| |
Sbjct: 3 tcaagagggacgcgaatctccgaatgcacatgcgaggccacggtgatgagtataaaacac 62
Query: 911 cagcagcccttgcgaaaccgcataaagaatccgggtctcaaccgaagcttattaagaggt 970
||||||| ||||| ||||| ||||||||| |||||||| |||| ||||||| |||||||
Sbjct: 63 cagcagctcttgcaaaaccacataaagaaaccgggtctgaaccacagcttatcaagaggt 122
Query: 971 attcctgcccttatcatgggtgcaagcgtaacaaggatcacaagaagtttctacctctga 1030
||||||| || || || ||||||||||||||||| || ||||| |||| |||||||
Sbjct: 123 attcctgtccctacaccggctgcaagcgtaacaaggaacataagaaatttcagcctctga 182
Query: 1031 agaccattttatgcgtcaaaaaccattacaaaagaacacactgtgacaaaagttacactt 1090
|||| |||||||| || |||||||| |||||||||||||||||||| || ||||||| ||
Sbjct: 183 agactattttatgtgtgaaaaaccactacaaaagaacacactgtgataagagttacattt 242
Query: 1091 gcagcagatgcaacaccaagaagttttcagtcttggctgatctaaaaactcatgaaaagc 1150
||||||||||| |||| ||||||||||| ||| | || ||||| ||||||||||| || |
Sbjct: 243 gcagcagatgccacacgaagaagttttcggtcatcgcagatctcaaaactcatgagaaac 302
Query: 1151 actgtggtaaggataaatggctttgttcatgtggcacaacattttcgaggaaagacaagc 1210
||||||| | ||||| ||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 303 actgtggcagagataagtggctgtgttcatgtggaacaacattttcgaggaaagacaagc 362
Query: 1211 tttttggacacattgctctttttcaaggtcacacaccagcaattcccttggatga 1265
|||||||||||||||| ||||| ||||| || |||||||||||||| |||||||
Sbjct: 363 tttttggacacattgcccttttccaaggccatacaccagcaattcctatggatga 417
Score = 89.7 bits (45), Expect = 5e-17
Identities = 169/209 (80%), Gaps = 6/209 (2%)
Strand = Plus / Plus
Query: 1294 atgaactcctgtttggtgtcaaatccttcaactga---aaatggagttcaaaatatcatg 1350
||||||| |||||| | ||||||||||||| ||| ||||||||||||||| || |||
Sbjct: 485 atgaacttctgttttggatcaaatccttcaagtgatcaaaatggagttcaaaacattatg 544
Query: 1351 gatgcaagagctaatattgatgatcctatcagttatctgtcatcattgaactttgaag-- 1408
|||| | || ||||||||||||||||||||||| | ||||| ||||||||||||
Sbjct: 545 gatgtcaaaggagatattgatgatcctatcagttatttctcatccctgaactttgaaggc 604
Query: 1409 -ctaactttggtgcgttcaacgaattcactcgacctccacctgaagaatcagaaagttct 1467
||||||||||| ||| || |||||| | | |||||| |||||| || ||| |||||
Sbjct: 605 tgtaactttggtgggtttaatgaattctcacagcctccatttgaagattccgaaggttct 664
Query: 1468 ttctcttttttcatgcccggatcttttaa 1496
|||||||| ||||| ||||||| |||||
Sbjct: 665 ttctctttcctcatgtccggatcatttaa 693
>gnl|LJGI|FS339239 similar to UniRef100_A5A8C1 Cluster: C2-H2 zinc finger protein;
n=1; Arabidopsis thaliana|Rep: C2-H2 zinc finger protein
- Arabidopsis thaliana (Mouse-ear cress), partial (13%)
Length = 751
Score = 103 bits (52), Expect = 3e-21
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 464 ctgatcttacatcaattattgttcaattgatctctactgcaggcagtcttctcccttcgg 523
||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||| || |
Sbjct: 473 ctgatcttacatcaattattgttcagttgatctctacagcaggtagtcttctcccatctg 532
Query: 524 ttcggcagacccttataaat 543
||||||| ||||||| ||||
Sbjct: 533 ttcggcacacccttacaaat 552
Score = 75.8 bits (38), Expect = 7e-13
Identities = 94/112 (83%), Gaps = 3/112 (2%)
Strand = Plus / Plus
Query: 628 ccacaaaataataacggaaataaactgtctgatcaatccatgcagaatgatctacctagt 687
||||||||||||| |||| |||| ||| |||||| ||||| ||||||||||||||| |
Sbjct: 640 ccacaaaataatagtggaagtaaattgtttgatcagtccattcagaatgatctacctcat 699
Query: 688 aatcgcgaaatggaacaaaactaca---tggaagaacatgaatataaagatg 736
|| | |||||||| |||||| ||| |||||||||||||| |||||||||
Sbjct: 700 aactgtgaaatggagcaaaaccacaatgtggaagaacatgaacataaagatg 751