Miyakogusa Predicted Gene

Lj2g3v0216900.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v0216900.1 Non Chatacterized Hit- tr|A5BSF4|A5BSF4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,40,0.00000000000001,GB DEF: HYPOTHETICAL PROTEIN F7P12.4,NULL;
FAMILY NOT NAMED,Transmembrane protein 18; FHA_DOMAIN,For,CUFF.34375.1
         (4044 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78668 similar to UniRef100_A7Q7D4 Cluster: Chromosome...   722   0.0  

>gnl|LJGI|TC78668 similar to UniRef100_A7Q7D4 Cluster: Chromosome chr18 scaffold_59,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr18 scaffold_59, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (17%)
          Length = 641

 Score =  722 bits (364), Expect = 0.0
 Identities = 377/380 (99%), Gaps = 1/380 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3666 tggtgggattgggagcttcatggagattccatcaccaacaatagaagatcacatccttga 3725
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    tggtgggattgggagcttcatggagattccatcaccaacaatagaagatcacatccttga 60

                                                                        
Query: 3726 ctttactcttctacataaaaggaagcaaattgatggacaacttgtccttcttagtgagga 3785
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   ctttactcttctacataaaaggaagcaaattgatggacaacttgtccttcttagtgagga 120

                                                                        
Query: 3786 tgtcactttgaaaatcaattgcatggcagaggggttgctatgtgagccagtgcaggaatt 3845
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  tgtcactttgaaaatcaattgcatggcagaggggttgctatgtgagccagtgcaggaatt 180

                                                                        
Query: 3846 tcgtgagagtctagtgaatccattctctgagaggttcttgtggaaaaacagctctgctcg 3905
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  tcgtgagagtctagtgaatccattctctgagaggttcttgtggaaaaacagctctgctcg 240

                                                                        
Query: 3906 aggacaaacat-ggtgttgcgaggacgatgtagttttgagggagagatattgtcgtttgc 3964
            ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  aggacaaacatcggtgttgcgaggacgatgtagttttgagggagagatattgtcgtttgc 300

                                                                        
Query: 3965 ctctgaggaagtcatcaaagggagctgcaagcggcttgaagctcattctgctccacaatt 4024
            || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  ctttgaggaagtcatccaagggagctgcaagcggcttgaagctcattctgctccacaatt 360

                                
Query: 4025 ctcaatatggccactgacag 4044
            ||||||||||||||||||||
Sbjct: 361  ctcaatatggccactgacag 380