Miyakogusa Predicted Gene
- Lj2g3v0205750.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0205750.1 tr|A9SFF8|A9SFF8_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_211738,31.79,4e-16,LIPID-BINDING SERUM GLYCOPROTEIN
FAMILY PROTEIN,NULL; BACTERICIDAL PERMEABILITY-INCREASING (BPI)
PRO,CUFF.34363.1
(606 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO016360 weakly similar to UniRef100_Q0DCN0 Cluster: Os... 303 7e-82
gnl|LJGI|FS353484 weakly similar to UniRef100_A7Q348 Cluster: Ch... 88 7e-17
gnl|LJGI|GO032244 weakly similar to UniRef100_A7PXC2 Cluster: Ch... 88 7e-17
gnl|LJGI|TC80864 similar to UniRef100_A7PBM7 Cluster: Chromosome... 88 7e-17
gnl|LJGI|TC77797 similar to UniRef100_Q533R9 Cluster: MADS box p... 88 7e-17
gnl|LJGI|TC65338 88 7e-17
gnl|LJGI|TC62098 similar to UniRef100_Q533R9 Cluster: MADS box p... 88 7e-17
gnl|LJGI|TC63427 weakly similar to UniRef100_A7PXC2 Cluster: Chr... 76 3e-13
>gnl|LJGI|GO016360 weakly similar to UniRef100_Q0DCN0 Cluster: Os06g0309200 protein;
n=1; Oryza sativa Japonica Group|Rep: Os06g0309200
protein - Oryza sativa subsp. japonica (Rice), partial
(40%)
Length = 801
Score = 303 bits (153), Expect = 7e-82
Identities = 171/177 (96%)
Strand = Plus / Minus
Query: 379 ggtggtttaccaaacatgataaaggtttcactacatgaatatgtgatccaatctgctagc 438
|||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 801 ggtggtttaccaaagatgataaaggtttcactacatgaatatgtgattcaatctgctagt 742
Query: 439 ctggtttatttcaatgctggtaaaatgcaattgattatcgatgaactacccgatcaggtc 498
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 741 ctggtttatttcaatgctggtaaaatgcaattgattatcgatgaactacctgatcaggac 682
Query: 499 attttgaacactgctgaatgcagattcatagttcctcaattatacaaacaatatcca 555
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 681 attttgaacactgctgaatggagattcatagttcctcaattatacaaacaatatcca 625
>gnl|LJGI|FS353484 weakly similar to UniRef100_A7Q348 Cluster: Chromosome chr12
scaffold_47, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_47, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 649
Score = 87.7 bits (44), Expect = 7e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 555 atatgtatttgacactatgtttttaattatgcttgacattttaccatgacta 606
|||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 100 atatgtatttgatactatgtttttaattatacttgacattttaccatgacta 49
>gnl|LJGI|GO032244 weakly similar to UniRef100_A7PXC2 Cluster: Chromosome chr12
scaffold_36, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_36, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (25%)
Length = 673
Score = 87.7 bits (44), Expect = 7e-17
Identities = 260/332 (78%)
Strand = Plus / Plus
Query: 224 tagacaaaacttctgcactaaatgtttcttttgtcggcaatcctgtgttgagtaattcct 283
||||||||||| ||| ||||||||||||||||| | ||||||||| |||||||||| |
Sbjct: 10 tagacaaaactgctgttctaaatgtttcttttgtggacaatcctgttctgagtaattctt 69
Query: 284 ctatagctattgcaattaatggtttattcacagagagaagtgaagttgtagaatctgaag 343
|| | | ||||||||||||| |||||||||| ||||| || ||| ||| | ||||||
Sbjct: 70 ctgttgaacttgcaattaatggcttattcacagggagaaacgatgttttagtaactgaag 129
Query: 344 gttataagaaaggatttaagatttcctctgcctgtggtggtttaccaaacatgataaagg 403
|| | ||| ||| | |||| | ||| |||| || ||||||| |||||||||
Sbjct: 130 aataccacaaaagatcagaagtttctgtttcctatggtagtgtaccaaagatgataaaga 189
Query: 404 tttcactacatgaatatgtgatccaatctgctagcctggtttatttcaatgctggtaaaa 463
||||| |||||||| |||| || |||| ||| | | ||||| |||||||| | |||
Sbjct: 190 tttcattacatgaaaatgttttcaaatcagcttccatagtttacttcaatgcagataagt 249
Query: 464 tgcaattgattatcgatgaactacccgatcaggtcattttgaacactgctgaatgcagat 523
|||||| |||| | ||||||||||| ||||||| ||||||||||||||||||| | |
Sbjct: 250 tgcaatggattgttgatgaactacctgatcaggcgtttttgaacactgctgaatggaaaa 309
Query: 524 tcatagttcctcaattatacaaacaatatcca 555
|| | |||| ||||||||||| | |||||||
Sbjct: 310 tccttattccgcaattatacaagctatatcca 341
>gnl|LJGI|TC80864 similar to UniRef100_A7PBM7 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 629
Score = 87.7 bits (44), Expect = 7e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 555 atatgtatttgacactatgtttttaattatgcttgacattttaccatgacta 606
|||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 530 atatgtatttgatactatgtttttaattatacttgacattttaccatgacta 581
>gnl|LJGI|TC77797 similar to UniRef100_Q533R9 Cluster: MADS box protein AGL1; n=1;
Lotus japonicus|Rep: MADS box protein AGL1 - Lotus
japonicus, partial (12%)
Length = 1039
Score = 87.7 bits (44), Expect = 7e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 555 atatgtatttgacactatgtttttaattatgcttgacattttaccatgacta 606
|||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 928 atatgtatttgatactatgtttttaattatacttgacattttaccatgacta 979
>gnl|LJGI|TC65338
Length = 674
Score = 87.7 bits (44), Expect = 7e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 555 atatgtatttgacactatgtttttaattatgcttgacattttaccatgacta 606
|||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 558 atatgtatttgatactatgtttttaattatacttgacattttaccatgacta 609
>gnl|LJGI|TC62098 similar to UniRef100_Q533R9 Cluster: MADS box protein AGL1; n=1;
Lotus japonicus|Rep: MADS box protein AGL1 - Lotus
japonicus, partial (12%)
Length = 726
Score = 87.7 bits (44), Expect = 7e-17
Identities = 50/52 (96%)
Strand = Plus / Plus
Query: 555 atatgtatttgacactatgtttttaattatgcttgacattttaccatgacta 606
|||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 586 atatgtatttgatactatgtttttaattatacttgacattttaccatgacta 637
>gnl|LJGI|TC63427 weakly similar to UniRef100_A7PXC2 Cluster: Chromosome chr12
scaffold_36, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_36, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (27%)
Length = 1034
Score = 75.8 bits (38), Expect = 3e-13
Identities = 137/170 (80%)
Strand = Plus / Plus
Query: 386 taccaaacatgataaaggtttcactacatgaatatgtgatccaatctgctagcctggttt 445
||||||| ||||||||| || || |||||||| |||| || |||| ||| | | ||||
Sbjct: 72 taccaaagatgataaagattgcattacatgaaaatgttttcaaatcagcttccttagttt 131
Query: 446 atttcaatgctggtaaaatgcaattgattatcgatgaactacccgatcaggtcattttga 505
| |||||||| | ||| |||||| |||||| ||||||||||| ||||||| ||||||
Sbjct: 132 acttcaatgcagataagttgcaatggattattgatgaactacctgatcaggcgtttttga 191
Query: 506 acactgctgaatgcagattcatagttcctcaattatacaaacaatatcca 555
||||||||||||| | | || | |||| ||||||||||| | |||||||
Sbjct: 192 acactgctgaatggaaaatccttattccgcaattatacaagctatatcca 241