Miyakogusa Predicted Gene
- Lj2g3v0179290.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0179290.1 tr|I3S8R8|I3S8R8_LOTJA Ribulose bisphosphate
carboxylase small chain OS=Lotus japonicus PE=2
SV=1,99.44,0,RUBISCOSMALL,Ribulose bisphosphate carboxylase, small
chain; no description,Ribulose bisphosphate ca,CUFF.37622.1
(534 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60984 similar to UniRef100_Q39832 Cluster: Ribulose-1... 1059 0.0
gnl|LJGI|AV420075 similar to UniRef100_P32764 Cluster: Ribulose ... 607 e-173
gnl|LJGI|AV770261 similar to UniRef100_O65194 Cluster: Ribulose ... 521 e-147
gnl|LJGI|TC63864 similar to UniRef100_Q9ZP07 Cluster: Ribulose 1... 484 e-136
gnl|LJGI|TC67533 similar to UniRef100_P00869 Cluster: Ribulose b... 462 e-129
gnl|LJGI|TC58934 similar to UniRef100_Q9ZP07 Cluster: Ribulose 1... 452 e-126
gnl|LJGI|TC66013 similar to UniRef100_O65194 Cluster: Ribulose b... 444 e-124
gnl|LJGI|DC597768 similar to UniRef100_P00865 Cluster: Ribulose ... 337 4e-92
gnl|LJGI|TC70891 similar to UniRef100_Q9ZP07 Cluster: Ribulose 1... 319 1e-86
gnl|LJGI|AV774656 similar to UniRef100_P24007 Cluster: Ribulose ... 246 1e-64
gnl|LJGI|AV765033 similar to UniRef100_P00869 Cluster: Ribulose ... 222 2e-57
gnl|LJGI|AV773128 similar to UniRef100_O65194 Cluster: Ribulose ... 216 1e-55
gnl|LJGI|AV428935 similar to UniRef100_O65194 Cluster: Ribulose ... 208 3e-53
gnl|LJGI|AV422614 homologue to UniRef100_O65194 Cluster: Ribulos... 202 2e-51
gnl|LJGI|BP034895 similar to UniRef100_P24007 Cluster: Ribulose ... 200 6e-51
gnl|LJGI|BP054432 homologue to UniRef100_P10797 Cluster: Ribulos... 88 7e-17
gnl|LJGI|AV771385 UniRef100_Q5EG57 Cluster: Organic anion transp... 82 4e-15
>gnl|LJGI|TC60984 similar to UniRef100_Q39832 Cluster: Ribulose-1,5-bisphosphate
carboxylase small subunit precursor; n=1; Glycine
max|Rep: Ribulose-1,5-bisphosphate carboxylase small
subunit precursor - Glycine max (Soybean), partial (98%)
Length = 789
Score = 1059 bits (534), Expect = 0.0
Identities = 534/534 (100%)
Strand = Plus / Plus
Query: 1 atggcctcctctatgatttcctcccctgctgttaccactgttaaccatgccaacatggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 35 atggcctcctctatgatttcctcccctgctgttaccactgttaaccatgccaacatggtt 94
Query: 61 gccccattcactggtctcaaatccatggctggtttcccagttacaagaaaggccaacaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 gccccattcactggtctcaaatccatggctggtttcccagttacaagaaaggccaacaat 154
Query: 121 gacatcacctccattgcaagcaatggtggaagagtcaactgcatgcaggtgtggcctcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 gacatcacctccattgcaagcaatggtggaagagtcaactgcatgcaggtgtggcctcca 214
Query: 181 attggcaagaagaagtttgagaccctttcttaccttccaccactcaccgtggagcaattg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 attggcaagaagaagtttgagaccctttcttaccttccaccactcaccgtggagcaattg 274
Query: 241 gcaaaggaagtagaataccttatcaggaagggatgggttccttgcttggaatttgagact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gcaaaggaagtagaataccttatcaggaagggatgggttccttgcttggaatttgagact 334
Query: 301 gagaaagggtttgtgtaccgtgagaaccacaagtcaccaggatactatgatggacgttac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 gagaaagggtttgtgtaccgtgagaaccacaagtcaccaggatactatgatggacgttac 394
Query: 361 tggacaatgtggaagctgcccatgtttggaaccactgatgcttctcaggttttgaaggaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tggacaatgtggaagctgcccatgtttggaaccactgatgcttctcaggttttgaaggaa 454
Query: 421 cttgaggaggccaagaaggcataccccaacgccttcatccgtatcatcggattcgacaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 cttgaggaggccaagaaggcataccccaacgccttcatccgtatcatcggattcgacaac 514
Query: 481 aagcgccaagtgcagtgcatcagtttcatcgcacacaggccagaaggctactaa 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 aagcgccaagtgcagtgcatcagtttcatcgcacacaggccagaaggctactaa 568
>gnl|LJGI|AV420075 similar to UniRef100_P32764 Cluster: Ribulose bisphosphate
carboxylase small chain 3, chloroplast precursor; n=1;
Solanum tuberosum|Rep: Ribulose bisphosphate carboxylase
small chain 3, chloroplast precursor - Solanum tuberosum
(Potato), partial (55%)
Length = 384
Score = 607 bits (306), Expect = e-173
Identities = 306/306 (100%)
Strand = Plus / Plus
Query: 229 gtggagcaattggcaaaggaagtagaataccttatcaggaagggatgggttccttgcttg 288
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 gtggagcaattggcaaaggaagtagaataccttatcaggaagggatgggttccttgcttg 63
Query: 289 gaatttgagactgagaaagggtttgtgtaccgtgagaaccacaagtcaccaggatactat 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 gaatttgagactgagaaagggtttgtgtaccgtgagaaccacaagtcaccaggatactat 123
Query: 349 gatggacgttactggacaatgtggaagctgcccatgtttggaaccactgatgcttctcag 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 gatggacgttactggacaatgtggaagctgcccatgtttggaaccactgatgcttctcag 183
Query: 409 gttttgaaggaacttgaggaggccaagaaggcataccccaacgccttcatccgtatcatc 468
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 gttttgaaggaacttgaggaggccaagaaggcataccccaacgccttcatccgtatcatc 243
Query: 469 ggattcgacaacaagcgccaagtgcagtgcatcagtttcatcgcacacaggccagaaggc 528
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 ggattcgacaacaagcgccaagtgcagtgcatcagtttcatcgcacacaggccagaaggc 303
Query: 529 tactaa 534
||||||
Sbjct: 304 tactaa 309
>gnl|LJGI|AV770261 similar to UniRef100_O65194 Cluster: Ribulose bisphosphate
carboxylase small chain, chloroplast precursor; n=1;
Medicago sativa|Rep: Ribulose bisphosphate carboxylase
small chain, chloroplast precursor - Medicago sativa
(Alfalfa), partial (47%)
Length = 543
Score = 521 bits (263), Expect = e-147
Identities = 293/299 (97%), Gaps = 3/299 (1%)
Strand = Plus / Plus
Query: 6 ctcctctatgatttcctcccctgctgttaccactgttaaccatgccaacatggttgcccc 65
||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 18 ctcctctatgatt-cctcccctgctgttac-actgttaaccatgccaacatggttgcccc 75
Query: 66 attcactggtctcaaatccatggctggtttcccagttacaag-aaaggccaacaatgaca 124
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 76 attcactggtctcaaatccatggctggtttcccagttacaaggaaaggccaacaatgaca 135
Query: 125 tcacctccattgcaagcaatggtggaagagtcaactgcatgcaggtgtggcctccaattg 184
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 136 tcacctccattgcaagcaatggtggaagagtcaactgcatgcaggtgtggcctccaatag 195
Query: 185 gcaagaagaagtttgagaccctttcttaccttccaccactcaccgtggagcaattggcaa 244
||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 196 gcaagaagaagttcgagaccctttcttaccttccaccactcaccgtggagcaataggcaa 255
Query: 245 aggaagtagaataccttatcaggaagggatgggttccttgcttggaatttgagactgag 303
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 aggaagtagaataccttatcaggaagggatgggttccttgcttggaatttgagactgag 314
>gnl|LJGI|TC63864 similar to UniRef100_Q9ZP07 Cluster: Ribulose 1,5-bisphosphate
carboxylase small subunit precursor; n=1; Cicer
arietinum|Rep: Ribulose 1,5-bisphosphate carboxylase
small subunit precursor - Cicer arietinum (Chickpea)
(Garbanzo), partial (98%)
Length = 860
Score = 484 bits (244), Expect = e-136
Identities = 426/486 (87%), Gaps = 3/486 (0%)
Strand = Plus / Plus
Query: 49 gccaacatggttgccccattcactggtctcaaatccatggctggtttcccagttacaaga 108
||||||||||| || ||||||||||| ||||| ||||||||||| |||||||| ||||
Sbjct: 104 gccaacatggtggctccattcactggcctcaagtccatggctggcttcccagt---aaga 160
Query: 109 aaggccaacaatgacatcacctccattgcaagcaatggtggaagagtcaactgcatgcag 168
|||| |||||||||||| ||||||||||||| ||| ||||||||||| | |||||||||
Sbjct: 161 aaggtcaacaatgacattacctccattgcaaacaacggtggaagagtacaatgcatgcag 220
Query: 169 gtgtggcctccaattggcaagaagaagtttgagaccctttcttaccttccaccactcacc 228
||||||||||| ||||||||||||||||| ||||| ||||| ||||||||||||||||||
Sbjct: 221 gtgtggcctcctattggcaagaagaagttcgagactctttcataccttccaccactcacc 280
Query: 229 gtggagcaattggcaaaggaagtagaataccttatcaggaagggatgggttccttgcttg 288
|||||| | ||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 281 acagagcaactcttaaaggaagtagaataccttctcaggaaggggtgggttccttgcttg 340
Query: 289 gaatttgagactgagaaagggtttgtgtaccgtgagaaccacaagtcaccaggatactat 348
|| |||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||||
Sbjct: 341 gagtttgagacagagaaaggctttgtctaccgtgagaaccacaagtcacctggatactat 400
Query: 349 gatggacgttactggacaatgtggaagctgcccatgtttggaaccactgatgcttctcag 408
|| ||||| |||||||| ||||||||||| |||||||||||| || ||||||| | |||
Sbjct: 401 gacggacgctactggaccatgtggaagctccccatgtttggatgcagtgatgctacccag 460
Query: 409 gttttgaaggaacttgaggaggccaagaaggcataccccaacgccttcatccgtatcatc 468
|| |||||||||||||| ||||| |||||||||||||||||| || | || |||||
Sbjct: 461 gtgttgaaggaacttgatgaggctgtgaaggcataccccaacgcttttgtgcgcatcatt 520
Query: 469 ggattcgacaacaagcgccaagtgcagtgcatcagtttcatcgcacacaggccagaaggc 528
||||||||||| |||||||||||||||||||||||||| |||||||| |||| ||||
Sbjct: 521 ggattcgacaatgttcgccaagtgcagtgcatcagtttcattgcacacagaccagcaggc 580
Query: 529 tactaa 534
||||||
Sbjct: 581 tactaa 586
>gnl|LJGI|TC67533 similar to UniRef100_P00869 Cluster: Ribulose bisphosphate
carboxylase small chain 3C, chloroplast precursor; n=2;
Pisum sativum|Rep: Ribulose bisphosphate carboxylase
small chain 3C, chloroplast precursor - Pisum sativum
(Garden pea), partial (43%)
Length = 664
Score = 462 bits (233), Expect = e-129
Identities = 233/233 (100%)
Strand = Plus / Plus
Query: 302 agaaagggtttgtgtaccgtgagaaccacaagtcaccaggatactatgatggacgttact 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 agaaagggtttgtgtaccgtgagaaccacaagtcaccaggatactatgatggacgttact 217
Query: 362 ggacaatgtggaagctgcccatgtttggaaccactgatgcttctcaggttttgaaggaac 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 ggacaatgtggaagctgcccatgtttggaaccactgatgcttctcaggttttgaaggaac 277
Query: 422 ttgaggaggccaagaaggcataccccaacgccttcatccgtatcatcggattcgacaaca 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ttgaggaggccaagaaggcataccccaacgccttcatccgtatcatcggattcgacaaca 337
Query: 482 agcgccaagtgcagtgcatcagtttcatcgcacacaggccagaaggctactaa 534
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 agcgccaagtgcagtgcatcagtttcatcgcacacaggccagaaggctactaa 390
>gnl|LJGI|TC58934 similar to UniRef100_Q9ZP07 Cluster: Ribulose 1,5-bisphosphate
carboxylase small subunit precursor; n=1; Cicer
arietinum|Rep: Ribulose 1,5-bisphosphate carboxylase
small subunit precursor - Cicer arietinum (Chickpea)
(Garbanzo), partial (98%)
Length = 791
Score = 452 bits (228), Expect = e-126
Identities = 422/486 (86%), Gaps = 3/486 (0%)
Strand = Plus / Plus
Query: 49 gccaacatggttgccccattcactggtctcaaatccatggctggtttcccagttacaaga 108
|||| |||||| || ||||||||||| ||||| ||||||||||| |||||||||| ||
Sbjct: 96 gccagcatggtggctccattcactggcctcaagtccatggctggcttcccagtta---ga 152
Query: 109 aaggccaacaatgacatcacctccattgcaagcaatggtggaagagtcaactgcatgcag 168
||| | ||||||||||| ||||||||||||| ||| ||||||||||| | |||||||||
Sbjct: 153 aagacaaacaatgacattacctccattgcaaacaacggtggaagagtacaatgcatgcag 212
Query: 169 gtgtggcctccaattggcaagaagaagtttgagaccctttcttaccttccaccactcacc 228
||||||||||| |||||||||||||||| ||||| ||||| ||||| ||||||||||||
Sbjct: 213 gtgtggcctcctgttggcaagaagaagttcgagactctttcatacctgccaccactcacc 272
Query: 229 gtggagcaattggcaaaggaagtagaataccttatcaggaagggatgggttccttgcttg 288
|||||| || ||||||||| ||||||||| | |||||||| |||||||||||||||
Sbjct: 273 acagagcaactgttaaaggaagttgaataccttcttaggaaggggtgggttccttgcttg 332
Query: 289 gaatttgagactgagaaagggtttgtgtaccgtgagaaccacaagtcaccaggatactat 348
||||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||||||
Sbjct: 333 gaatttgagacagagaaaggctttgtttaccgtgagaaccacaagtcaccgggatactat 392
Query: 349 gatggacgttactggacaatgtggaagctgcccatgtttggaaccactgatgcttctcag 408
|| ||||| |||||||| ||||||||||||||||||||||| || ||||||| |||||
Sbjct: 393 gacggacggtactggaccatgtggaagctgcccatgtttggctgcagtgatgctgctcag 452
Query: 409 gttttgaaggaacttgaggaggccaagaaggcataccccaacgccttcatccgtatcatc 468
|| |||||||| ||||| ||||| ||||||||||||||| || ||| | || ||||||
Sbjct: 453 gtgttgaaggagcttgatgaggctgtgaaggcataccccaatgctttcgttcgcatcatc 512
Query: 469 ggattcgacaacaagcgccaagtgcagtgcatcagtttcatcgcacacaggccagaaggc 528
|||||||||||| |||||||||||||||||||| ||||| || |||||||| | ||||
Sbjct: 513 ggattcgacaacgttcgccaagtgcagtgcatcagcttcattgctcacaggcctgcaggc 572
Query: 529 tactaa 534
||||||
Sbjct: 573 tactaa 578
>gnl|LJGI|TC66013 similar to UniRef100_O65194 Cluster: Ribulose bisphosphate
carboxylase small chain, chloroplast precursor; n=1;
Medicago sativa|Rep: Ribulose bisphosphate carboxylase
small chain, chloroplast precursor - Medicago sativa
(Alfalfa), partial (96%)
Length = 844
Score = 444 bits (224), Expect = e-124
Identities = 421/486 (86%), Gaps = 3/486 (0%)
Strand = Plus / Plus
Query: 49 gccaacatggttgccccattcactggtctcaaatccatggctggtttcccagttacaaga 108
|||| |||||| || ||||||||||| ||||| ||||||||||| |||||||||| ||
Sbjct: 105 gccagcatggtggctccattcactggcctcaagtccatggctggcttcccagtta---ga 161
Query: 109 aaggccaacaatgacatcacctccattgcaagcaatggtggaagagtcaactgcatgcag 168
||| | ||||||||||| ||||||||||||| ||| ||||||||||| | |||||||||
Sbjct: 162 aagacaaacaatgacattacctccattgcaaacaacggtggaagagtacaatgcatgcag 221
Query: 169 gtgtggcctccaattggcaagaagaagtttgagaccctttcttaccttccaccactcacc 228
||||||||||| |||||||||||||||| ||||| ||||| ||||||||||||||||||
Sbjct: 222 gtgtggcctcctgttggcaagaagaagttcgagactctttcataccttccaccactcacc 281
Query: 229 gtggagcaattggcaaaggaagtagaataccttatcaggaagggatgggttccttgcttg 288
|||||| | ||||||||||||||||||| | |||||||| |||||||||||||||
Sbjct: 282 acagagcaactcttaaaggaagtagaataccttcttaggaagggttgggttccttgcttg 341
Query: 289 gaatttgagactgagaaagggtttgtgtaccgtgagaaccacaagtcaccaggatactat 348
||||| ||||| |||||||| ||||| ||||||||||||||||||||||| |||||||||
Sbjct: 342 gaattcgagacagagaaaggctttgtctaccgtgagaaccacaagtcacctggatactat 401
Query: 349 gatggacgttactggacaatgtggaagctgcccatgtttggaaccactgatgcttctcag 408
|| ||||| |||||||| ||||||||||| ||||||||||| || ||||||| | |||
Sbjct: 402 gacggacgctactggaccatgtggaagctccccatgtttgggtgcagtgatgctacccag 461
Query: 409 gttttgaaggaacttgaggaggccaagaaggcataccccaacgccttcatccgtatcatc 468
|| |||||||||||||| ||||| |||||||||||||||||| || | || |||||
Sbjct: 462 gtgttgaaggaacttgatgaggctgtgaaggcataccccaacgcttttgtgcgcatcatt 521
Query: 469 ggattcgacaacaagcgccaagtgcagtgcatcagtttcatcgcacacaggccagaaggc 528
||||||||||| |||||||||||||||||||||||||| |||||||| |||| ||||
Sbjct: 522 ggattcgacaatgttcgccaagtgcagtgcatcagtttcattgcacacagaccagcaggc 581
Query: 529 tactaa 534
||||||
Sbjct: 582 tactaa 587
>gnl|LJGI|DC597768 similar to UniRef100_P00865 Cluster: Ribulose bisphosphate
carboxylase small chain 1, chloroplast precursor; n=1;
Glycine max|Rep: Ribulose bisphosphate carboxylase small
chain 1, chloroplast precursor - Glycine max (Soybean),
partial (56%)
Length = 573
Score = 337 bits (170), Expect = 4e-92
Identities = 170/170 (100%)
Strand = Plus / Plus
Query: 1 atggcctcctctatgatttcctcccctgctgttaccactgttaaccatgccaacatggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12 atggcctcctctatgatttcctcccctgctgttaccactgttaaccatgccaacatggtt 71
Query: 61 gccccattcactggtctcaaatccatggctggtttcccagttacaagaaaggccaacaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 gccccattcactggtctcaaatccatggctggtttcccagttacaagaaaggccaacaat 131
Query: 121 gacatcacctccattgcaagcaatggtggaagagtcaactgcatgcaggt 170
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 gacatcacctccattgcaagcaatggtggaagagtcaactgcatgcaggt 181
Score = 272 bits (137), Expect = 2e-72
Identities = 137/137 (100%)
Strand = Plus / Plus
Query: 167 aggtgtggcctccaattggcaagaagaagtttgagaccctttcttaccttccaccactca 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aggtgtggcctccaattggcaagaagaagtttgagaccctttcttaccttccaccactca 381
Query: 227 ccgtggagcaattggcaaaggaagtagaataccttatcaggaagggatgggttccttgct 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ccgtggagcaattggcaaaggaagtagaataccttatcaggaagggatgggttccttgct 441
Query: 287 tggaatttgagactgag 303
|||||||||||||||||
Sbjct: 442 tggaatttgagactgag 458
>gnl|LJGI|TC70891 similar to UniRef100_Q9ZP07 Cluster: Ribulose 1,5-bisphosphate
carboxylase small subunit precursor; n=1; Cicer
arietinum|Rep: Ribulose 1,5-bisphosphate carboxylase
small subunit precursor - Cicer arietinum (Chickpea)
(Garbanzo), partial (64%)
Length = 499
Score = 319 bits (161), Expect = 1e-86
Identities = 305/353 (86%)
Strand = Plus / Plus
Query: 182 ttggcaagaagaagtttgagaccctttcttaccttccaccactcaccgtggagcaattgg 241
|||||||||||||||||||||| ||||| ||||| |||||||||||| |||||| |
Sbjct: 7 ttggcaagaagaagtttgagactctttcatacctgccaccactcaccacagagcaactat 66
Query: 242 caaaggaagtagaataccttatcaggaagggatgggttccttgcttggaatttgagactg 301
||||||||| ||||||||| | |||||||| |||||||||||||||||||||||||| |
Sbjct: 67 taaaggaagtggaataccttcttaggaaggggtgggttccttgcttggaatttgagacgg 126
Query: 302 agaaagggtttgtgtaccgtgagaaccacaagtcaccaggatactatgatggacgttact 361
||||||| ||||| ||||||||||||||||||||||| ||||||||||| ||||| ||||
Sbjct: 127 agaaaggctttgtctaccgtgagaaccacaagtcacctggatactatgacggacgctact 186
Query: 362 ggacaatgtggaagctgcccatgtttggaaccactgatgcttctcaggttttgaaggaac 421
|||| ||||||||||| ||||||||||| || ||||||| | ||||| ||||||||||
Sbjct: 187 ggaccatgtggaagctccccatgtttgggtgcagtgatgctgcccaggtgttgaaggaac 246
Query: 422 ttgaggaggccaagaaggcataccccaacgccttcatccgtatcatcggattcgacaaca 481
|||| ||||| |||||||||||| | ||| || | || ||||| |||||||||||
Sbjct: 247 ttgatgaggctgtgaaggcatacccgaccgcttttgtgcgcatcattggattcgacaatg 306
Query: 482 agcgccaagtgcagtgcatcagtttcatcgcacacaggccagaaggctactaa 534
|||||||||||||||||||| ||||| ||||||||||||| ||||||||||
Sbjct: 307 ttcgccaagtgcagtgcatcagcttcattgcacacaggccagcaggctactaa 359
>gnl|LJGI|AV774656 similar to UniRef100_P24007 Cluster: Ribulose bisphosphate
carboxylase small chain, chloroplast precursor; n=1;
Pyrus pyrifolia|Rep: Ribulose bisphosphate carboxylase
small chain, chloroplast precursor - Pyrus pyrifolia
(Japanese pear) (Pyrus serotina), partial (32%)
Length = 456
Score = 246 bits (124), Expect = 1e-64
Identities = 193/212 (91%), Gaps = 3/212 (1%)
Strand = Plus / Minus
Query: 306 agggtttgtgtaccgtgagaaccacaagtcaccaggatactatgatggacgttactggac 365
||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 456 agggtttgtgttccgtgagaaccacaagtcaccaggatactatgatggacggtactggac 397
Query: 366 aatgtggaagctgcccatgtttggaaccactgatgcttctcaggttttgaaggaacttga 425
|| |||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||
Sbjct: 396 catctggaagctgcccatgtttgggacccctgatgcttttcaggttttgaaggaacttga 337
Query: 426 ggaggccaag-aaggcatacccc-aacgccttcatccgtatcatcggattcgacaacaag 483
||||||| || ||||||||||| || |||||||||||||||||||||||||| || ||
Sbjct: 336 ggaggcccagtcaggcataccccttaccccttcatccgtatcatcggattcgactaccag 277
Query: 484 cg-ccaagtgcagtgcatcagtttcatcgcac 514
|| || ||| | ||||||||||||||||||||
Sbjct: 276 cgccccagtcccgtgcatcagtttcatcgcac 245
>gnl|LJGI|AV765033 similar to UniRef100_P00869 Cluster: Ribulose bisphosphate
carboxylase small chain 3C, chloroplast precursor; n=2;
Pisum sativum|Rep: Ribulose bisphosphate carboxylase
small chain 3C, chloroplast precursor - Pisum sativum
(Garden pea), partial (27%)
Length = 479
Score = 222 bits (112), Expect = 2e-57
Identities = 198/224 (88%), Gaps = 2/224 (0%)
Strand = Plus / Minus
Query: 305 aagggtttgtgtaccgtgagaaccacaagtcaccaggatactatgatggacgttactgga 364
|||||||||||| | |||||| ||||||||||||||||||||||||||||||| |||||
Sbjct: 451 aagggtttgtgttcggtgagagccacaagtcaccaggatactatgatggacgtaactggc 392
Query: 365 caatgtggaagctgcccatgtttggaaccactgatgcttctcaggttttgaaggaacttg 424
|||||||||||||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct: 391 caatgtggaagctgcccatgtttgtaaccaccgatgcttctcaggttttgaaggaac-cc 333
Query: 425 aggaggccaagaaggcataccccaacgccttcatccgtatcatcggattcgacaacaagc 484
| || |||||||||||| ||||||||||||| || ||||||| || || | |||| |||
Sbjct: 332 cgcagcccaagaaggcattccccaacgccttcctctgtatcatgggcttggtcaacgagc 273
Query: 485 gccaagtgcagtgcatcagtttcatcgcaca-caggccagaagg 527
|||||||||| | ||||||||||| ||||| ||||||||||||
Sbjct: 272 tccaagtgcagggaatcagtttcattgcacatcaggccagaagg 229
>gnl|LJGI|AV773128 similar to UniRef100_O65194 Cluster: Ribulose bisphosphate
carboxylase small chain, chloroplast precursor; n=1;
Medicago sativa|Rep: Ribulose bisphosphate carboxylase
small chain, chloroplast precursor - Medicago sativa
(Alfalfa), partial (24%)
Length = 531
Score = 216 bits (109), Expect = 1e-55
Identities = 130/136 (95%), Gaps = 1/136 (0%)
Strand = Plus / Plus
Query: 169 gtgtggcctccaattggcaagaagaagtttgagaccctttcttaccttccaccactcacc 228
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 144 gtgtggcctccaatgggcaagaagaagttcgagaccctttcttaccttccaccactcacc 203
Query: 229 gtgg-agcaattggcaaaggaagtagaataccttatcaggaagggatgggttccttgctt 287
| || |||||| ||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 204 gcggcagcaatnggcaaaggaagtacaataccttatcaggaagggatgggttccttgctt 263
Query: 288 ggaatttgagactgag 303
||||||||||||||||
Sbjct: 264 ggaatttgagactgag 279
>gnl|LJGI|AV428935 similar to UniRef100_O65194 Cluster: Ribulose bisphosphate
carboxylase small chain, chloroplast precursor; n=1;
Medicago sativa|Rep: Ribulose bisphosphate carboxylase
small chain, chloroplast precursor - Medicago sativa
(Alfalfa), partial (38%)
Length = 339
Score = 208 bits (105), Expect = 3e-53
Identities = 181/205 (88%), Gaps = 1/205 (0%)
Strand = Plus / Plus
Query: 182 ttggcaagaagaagtttgagaccctttcttaccttccaccactcaccgtggagcaattgg 241
||||||||||||| |||||||| ||||| ||||| |||||||||||| |||||| |
Sbjct: 6 ttggcaagaagaaatttgagactctttcatacctgccaccactcaccacagagcaactat 65
Query: 242 caaaggaagtagaataccttatcaggaagggatgggttccttgcttggaatttgagactg 301
||||||||| ||||||||| | | |||||| |||||||||||||||||||||||||| |
Sbjct: 66 taaaggaagtggaataccttcttatgaaggggtgggttccttgcttggaatttgagacgg 125
Query: 302 agaaagggtttgtgtaccgtgagaaccacaagtcaccaggatactatgatggacgttact 361
||||||| ||||| ||||||||||||||||||||||| ||||||||||| ||||| ||||
Sbjct: 126 agaaaggctttgtctaccgtgagaaccacaagtcacctggatactatgacggacgctact 185
Query: 362 ggacaatgtggaagctgcccatgtt 386
|||| ||||||||||| ||||||||
Sbjct: 186 ggaccatgtggaagct-cccatgtt 209
>gnl|LJGI|AV422614 homologue to UniRef100_O65194 Cluster: Ribulose bisphosphate
carboxylase small chain, chloroplast precursor; n=1;
Medicago sativa|Rep: Ribulose bisphosphate carboxylase
small chain, chloroplast precursor - Medicago sativa
(Alfalfa), partial (34%)
Length = 276
Score = 202 bits (102), Expect = 2e-51
Identities = 162/182 (89%)
Strand = Plus / Plus
Query: 182 ttggcaagaagaagtttgagaccctttcttaccttccaccactcaccgtggagcaattgg 241
|||||||||||||||||||||| ||||| ||||| |||||||||||| |||||| |
Sbjct: 6 ttggcaagaagaagtttgagactctttcatacctgccaccactcaccacagagcaactat 65
Query: 242 caaaggaagtagaataccttatcaggaagggatgggttccttgcttggaatttgagactg 301
||||||||| ||||||||| | |||||||| |||||||||||||||||||||||||| |
Sbjct: 66 taaaggaagtggaataccttcttaggaaggggtgggttccttgcttggaatttgagacgg 125
Query: 302 agaaagggtttgtgtaccgtgagaaccacaagtcaccaggatactatgatggacgttact 361
||||||| ||||| ||||||||||||||||||||||| ||||||||||| ||||| ||||
Sbjct: 126 agaaaggctttgtctaccgtgagaaccacaagtcacctggatactatgacggacgctact 185
Query: 362 gg 363
||
Sbjct: 186 gg 187
>gnl|LJGI|BP034895 similar to UniRef100_P24007 Cluster: Ribulose bisphosphate
carboxylase small chain, chloroplast precursor; n=1;
Pyrus pyrifolia|Rep: Ribulose bisphosphate carboxylase
small chain, chloroplast precursor - Pyrus pyrifolia
(Japanese pear) (Pyrus serotina), partial (40%)
Length = 500
Score = 200 bits (101), Expect = 6e-51
Identities = 200/233 (85%)
Strand = Plus / Minus
Query: 302 agaaagggtttgtgtaccgtgagaaccacaagtcaccaggatactatgatggacgttact 361
||||||| ||||| ||||||||||||||||||||||| ||||||||||| ||||| ||||
Sbjct: 367 agaaaggctttgtctaccgtgagaaccacaagtcacctggatactatgacggacgctact 308
Query: 362 ggacaatgtggaagctgcccatgtttggaaccactgatgcttctcaggttttgaaggaac 421
|||| ||||||||||| ||||||||||| || ||||||| | ||||| ||||||||||
Sbjct: 307 ggaccatgtggaagctccccatgtttgggtgcagtgatgctgcccaggtgttgaaggaac 248
Query: 422 ttgaggaggccaagaaggcataccccaacgccttcatccgtatcatcggattcgacaaca 481
|||| ||||| |||||||||||| | ||| || | || ||||| |||||||||||
Sbjct: 247 ttgatgaggctgtgaaggcatacccgaccgcttttgtgcgcatcattggattcgacaatg 188
Query: 482 agcgccaagtgcagtgcatcagtttcatcgcacacaggccagaaggctactaa 534
|||||||||||||||||||| ||||| ||||||||||||| ||||||||||
Sbjct: 187 ttcgccaagtgcagtgcatcagcttcattgcacacaggccagcaggctactaa 135
>gnl|LJGI|BP054432 homologue to UniRef100_P10797 Cluster: Ribulose bisphosphate
carboxylase small chain 2B, chloroplast precursor; n=1;
Arabidopsis thaliana|Rep: Ribulose bisphosphate
carboxylase small chain 2B, chloroplast precursor -
Arabidopsis thaliana (Mouse-ear cress), partial (34%)
Length = 369
Score = 87.7 bits (44), Expect = 7e-17
Identities = 133/163 (81%)
Strand = Plus / Minus
Query: 347 atgatggacgttactggacaatgtggaagctgcccatgtttggaaccactgatgcttctc 406
|||||||||| |||||||||||||||||||| || |||| || ||| || | |||
Sbjct: 369 atgatggacggtactggacaatgtggaagcttccnttgttcggttgcaccgactccgctc 310
Query: 407 aggttttgaaggaacttgaggaggccaagaaggcataccccaacgccttcatccgtatca 466
| || ||||||||| | || ||| |||||||| |||||||| |||||||| | ||||
Sbjct: 309 aagtgttgaaggaagtggaagagtgcaagaaggagtaccccaatgccttcattaggatca 250
Query: 467 tcggattcgacaacaagcgccaagtgcagtgcatcagtttcat 509
||||||||||||||| || ||||| |||||||||||||||||
Sbjct: 249 tcggattcgacaacacccgtcaagtccagtgcatcagtttcat 207
>gnl|LJGI|AV771385 UniRef100_Q5EG57 Cluster: Organic anion transporting polypeptide
4c1; n=1; Bos taurus|Rep: Organic anion transporting
polypeptide 4c1 - Bos taurus (Bovine), partial (5%)
Length = 360
Score = 81.8 bits (41), Expect = 4e-15
Identities = 73/81 (90%), Gaps = 2/81 (2%)
Strand = Plus / Minus
Query: 409 gttttgaaggaacttgaggaggccaagaaggcat-accccaacgccttcatccgtatca- 466
|||||||||||||||||||||||| |||||| || ||||| || |||||||||||||||
Sbjct: 360 gttttgaaggaacttgaggaggcccagaaggaataacccccaccccttcatccgtatcac 301
Query: 467 tcggattcgacaacaagcgcc 487
||||||||||| || ||||||
Sbjct: 300 tcggattcgactaccagcgcc 280