Miyakogusa Predicted Gene
- Lj2g3v0178230.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0178230.1 Non Chatacterized Hit- tr|C6T1M3|C6T1M3_SOYBN
Putative uncharacterized protein OS=Glycine max PE=2
S,43.75,0.000000000000004,seg,NULL,CUFF.34316.1
(765 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57955 weakly similar to UniRef100_A8JFD4 Cluster: Gly... 1251 0.0
gnl|LJGI|TC73669 homologue to UniRef100_A8EV80 Cluster: Auxin ef... 648 0.0
gnl|LJGI|TC71183 similar to UniRef100_A7QAR0 Cluster: Chromosome... 52 5e-06
>gnl|LJGI|TC57955 weakly similar to UniRef100_A8JFD4 Cluster: Glyoxal or galactose
oxidase; n=1; Chlamydomonas reinhardtii|Rep: Glyoxal or
galactose oxidase - Chlamydomonas reinhardtii, partial
(3%)
Length = 800
Score = 1251 bits (631), Expect = 0.0
Identities = 645/652 (98%)
Strand = Plus / Plus
Query: 1 atgaagactgtccaagttgctgcaaggcagcctgttattcctgtcgaaagcaaattttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 atgaagactgtccaagttgctgcaaggcagcctgttattcctgtcgaaagcaaattttct 208
Query: 61 gcaaggaagcctgttattcctgtcaaaaacaaatctcagtcgcaccattttacctcttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 gcaaggaagcctgttattcctgtcaaaaacaaatctcagtcgcaccattttacctcttta 268
Query: 121 ccatgtatatcatcaatgaatgccttccctctctctaggacttccttgagaccaggagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ccatgtatatcatcaatgaatgccttccctctctctaggacttccttgagaccaggagca 328
Query: 181 agacctgcatttggcttgccatatttgcctgttctgaaatctcagcaacctttccatgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 agacctgcatttggcttgccatatttgcctgttctgaaatctcagcaacctttccatgtt 388
Query: 241 tgtttagctggtggaaaaggaatgatgggaagtaacgaggattcccggtggaaatctcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tgtttagctggtggaaaaggaatgatgggaagtaacgaggattcccggtggaaatctcct 448
Query: 301 gaggcagaaatagaaaaattgaagggacagtcaatagaggatatgttacgacagcaaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 gaggcagaaatagaaaaattgaagggacagtcaatagaggatatgttacgacagcaaatt 508
Query: 361 cataagcnnnnnnntgggggaggtggggacaagcctccaggaggacgtggtcgtggtggt 420
||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 cataagcaaaaaaatgggggaggtggggacaagcctccaggaggacgtggtcgtggtggt 568
Query: 421 ggtggtcctggaggatcagaggagggagactttgctgggctgtcagatgagattcagcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ggtggtcctggaggatcagaggagggagactttgctgggctgtcagatgagattcagcaa 628
Query: 481 atcatcttagcaacaattggtttcatattagtgtatatttgtgtcatcgatggtgtggag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 atcatcttagcaacaattggtttcatattagtgtatatttgtgtcatcgatggtgtggag 688
Query: 541 cttgcaaagctgtctaaggatatcctcaagtatctgtttggtggaacccagagtcttcga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 cttgcaaagctgtctaaggatatcctcaagtatctgtttggtggaacccagagtcttcga 748
Query: 601 ttgaaaaaagccatctacaagtggacgcgattttttaagcttttgacaggga 652
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 ttgaaaaaagccatctacaagtggacgcgattttttaagcttttgacaggga 800
>gnl|LJGI|TC73669 homologue to UniRef100_A8EV80 Cluster: Auxin efflux carrier
protein; n=1; Arcobacter butzleri RM4018|Rep: Auxin
efflux carrier protein - Arcobacter butzleri (strain
RM4018), partial (5%)
Length = 1084
Score = 648 bits (327), Expect = 0.0
Identities = 327/327 (100%)
Strand = Plus / Plus
Query: 1 atgaagactgtccaagttgctgcaaggcagcctgttattcctgtcgaaagcaaattttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 atgaagactgtccaagttgctgcaaggcagcctgttattcctgtcgaaagcaaattttct 231
Query: 61 gcaaggaagcctgttattcctgtcaaaaacaaatctcagtcgcaccattttacctcttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 gcaaggaagcctgttattcctgtcaaaaacaaatctcagtcgcaccattttacctcttta 291
Query: 121 ccatgtatatcatcaatgaatgccttccctctctctaggacttccttgagaccaggagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 ccatgtatatcatcaatgaatgccttccctctctctaggacttccttgagaccaggagca 351
Query: 181 agacctgcatttggcttgccatatttgcctgttctgaaatctcagcaacctttccatgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 agacctgcatttggcttgccatatttgcctgttctgaaatctcagcaacctttccatgtt 411
Query: 241 tgtttagctggtggaaaaggaatgatgggaagtaacgaggattcccggtggaaatctcct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tgtttagctggtggaaaaggaatgatgggaagtaacgaggattcccggtggaaatctcct 471
Query: 301 gaggcagaaatagaaaaattgaaggga 327
|||||||||||||||||||||||||||
Sbjct: 472 gaggcagaaatagaaaaattgaaggga 498
Score = 640 bits (323), Expect = 0.0
Identities = 323/323 (100%)
Strand = Plus / Plus
Query: 443 agggagactttgctgggctgtcagatgagattcagcaaatcatcttagcaacaattggtt 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 agggagactttgctgggctgtcagatgagattcagcaaatcatcttagcaacaattggtt 553
Query: 503 tcatattagtgtatatttgtgtcatcgatggtgtggagcttgcaaagctgtctaaggata 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tcatattagtgtatatttgtgtcatcgatggtgtggagcttgcaaagctgtctaaggata 613
Query: 563 tcctcaagtatctgtttggtggaacccagagtcttcgattgaaaaaagccatctacaagt 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 tcctcaagtatctgtttggtggaacccagagtcttcgattgaaaaaagccatctacaagt 673
Query: 623 ggacgcgattttttaagcttttgacagggaataggaaagttcttaagaatgagttggagg 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ggacgcgattttttaagcttttgacagggaataggaaagttcttaagaatgagttggagg 733
Query: 683 aagccccaacacagaggaacaacctcgattactaccatgatgatgtccttaggaattaca 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 aagccccaacacagaggaacaacctcgattactaccatgatgatgtccttaggaattaca 793
Query: 743 tgaaaccaaattcagatgcataa 765
|||||||||||||||||||||||
Sbjct: 794 tgaaaccaaattcagatgcataa 816
>gnl|LJGI|TC71183 similar to UniRef100_A7QAR0 Cluster: Chromosome chr5 scaffold_72,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_72, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 682
Score = 52.0 bits (26), Expect = 5e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 313 gaaaaattgaagggacagtcaatagaggatatgttacgacagcaaattca 362
|||||||| |||||||| |||||||| ||| || |||| |||||||||||
Sbjct: 371 gaaaaatttaagggacaatcaatagaagatgtgctacggcagcaaattca 420