Miyakogusa Predicted Gene
- Lj2g3v0146660.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v0146660.1 Non Chatacterized Hit- tr|D7MFT6|D7MFT6_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,37.78,1e-17,seg,NULL,CUFF.34326.1
(845 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81160 similar to UniRef100_A7A1L4 Cluster: Conserved ... 700 0.0
gnl|LJGI|TC66728 similar to UniRef100_A7PFR7 Cluster: Chromosome... 331 4e-90
gnl|LJGI|TC60979 similar to UniRef100_A7P9E5 Cluster: Chromosome... 82 6e-15
gnl|LJGI|TC59801 62 6e-09
gnl|LJGI|TC71339 54 1e-06
>gnl|LJGI|TC81160 similar to UniRef100_A7A1L4 Cluster: Conserved protein; n=1;
Saccharomyces cerevisiae YJM789|Rep: Conserved protein -
Saccharomyces cerevisiae (strain YJM789) (Baker's
yeast), partial (7%)
Length = 499
Score = 700 bits (353), Expect = 0.0
Identities = 387/397 (97%), Gaps = 1/397 (0%)
Strand = Plus / Plus
Query: 1 atgaacttcatcggagtcatcgacttctccgattct-caacttcaccggagtcatctcct 59
||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 103 atgaactccatcggagtcatcgacttctccgaggcggcaacttcaccggagtcatctcct 162
Query: 60 tcttcggttgaagtctcttctcggtgtccataggagattccgatcgatcctttcgttgct 119
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 163 tcttcggttgaagtctcttcccgatgtccataggagattccgatcgatcctttcgttgct 222
Query: 120 tggctccttcagaaagggcttcttggattcttcttcattttcggcatcgtctcttctgca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 tggctccttcagaaagggcttcttggattcttcttcattttcggcatcgtctcttctgca 282
Query: 180 cacagattcatggtttgtgcatcaaccctctgccattgttgttcagcctgagattgtcta 239
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 283 cacagattcatggtttgtgcatcaaccctctgccattgttgttcagcctaagattgtcta 342
Query: 240 tgatcacactgtttcacaagttgtggaggtaacaattttcaagactgaatgttcattttt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 tgatcacactgtttcacaagttgtggaggtaacaattttcaagactgaatgttcattttt 402
Query: 300 aatgactgaaattcatcaatttgtgaaactctggtttggattatggaatcattttcttgt 359
||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 403 aatgattgaaattcatcaatttatgaaactctggtttggattatggaatcattttcttgt 462
Query: 360 ttggccgattgttttgatattggtgtttgatcctgga 396
|||||||||||||||||||||||||||||||||||||
Sbjct: 463 ttggccgattgttttgatattggtgtttgatcctgga 499
>gnl|LJGI|TC66728 similar to UniRef100_A7PFR7 Cluster: Chromosome chr11 scaffold_14,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_14, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 1205
Score = 331 bits (167), Expect = 4e-90
Identities = 183/187 (97%), Gaps = 1/187 (0%)
Strand = Plus / Plus
Query: 659 gacttagctcccctgatctggttttcacatgtatcaccttcaagaacattgctgtagatg 718
|||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1 gacttagctccc-tgatctggttttcgcatgtatcaccttcaagaacattgctgtagatg 59
Query: 719 atgaactatgtaacttcattactgttacatgtggtatagatgcagtcctcagatatatga 778
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 60 atgaactatgtaacttcattactgttacatgtggtattgatgcagtcctcagatatatga 119
Query: 779 atgacagtggtgcacaaggcaacaaagttgtaatcacagattgctgcacgttattttttg 838
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 atggcagtggtgcacaaggcaacaaagttgtaatcacagattgctgcacgttattttttg 179
Query: 839 cctgaaa 845
|||||||
Sbjct: 180 cctgaaa 186
>gnl|LJGI|TC60979 similar to UniRef100_A7P9E5 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (39%)
Length = 713
Score = 81.8 bits (41), Expect = 6e-15
Identities = 86/101 (85%)
Strand = Plus / Plus
Query: 705 cattgctgtagatgatgaactatgtaacttcattactgttacatgtggtatagatgcagt 764
|||||||||| |||||||| ||||||| | |||| ||| || | ||||||| ||| ||||
Sbjct: 8 cattgctgtaaatgatgaaatatgtaaatccattgctgataaaggtggtattgattcagt 67
Query: 765 cctcagatatatgaatgacagtggtgcacaaggcaacaaag 805
||||||| ||| |||||||||||| ||||||||||||||
Sbjct: 68 gctcagatgtatagatgacagtggtgaacaaggcaacaaag 108
>gnl|LJGI|TC59801
Length = 1003
Score = 61.9 bits (31), Expect = 6e-09
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 385 tttgatcctggaggattttggctttgttcacaagatgtttgtgaaaa 431
|||||||||||||||||| || ||||||||||| ||||||||||||
Sbjct: 736 tttgatcctggaggatttagggattgttcacaagctgtttgtgaaaa 782
>gnl|LJGI|TC71339
Length = 1171
Score = 54.0 bits (27), Expect = 1e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 385 tttgatcctggaggattttggctttgttcacaagatgtttgtgaaaa 431
|||||||||||||||||| || |||||||| || ||||||||||||
Sbjct: 70 tttgatcctggaggatttagggattgttcacgagctgtttgtgaaaa 116