Miyakogusa Predicted Gene

Lj2g3v0146570.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v0146570.1 tr|A9U113|A9U113_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_173097,41.18,0.000000000000002,seg,NULL,CUFF.34268.1
         (564 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62409 similar to UniRef100_A7QSL4 Cluster: Chromosome...  1118   0.0  
gnl|LJGI|AV770156 homologue to UniRef100_A7QSL4 Cluster: Chromos...   281   2e-75

>gnl|LJGI|TC62409 similar to UniRef100_A7QSL4 Cluster: Chromosome undetermined
           scaffold_161, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_161,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (88%)
          Length = 1134

 Score = 1118 bits (564), Expect = 0.0
 Identities = 564/564 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcgtttatgaaaggagatttgctttctcgaaccagaaagcttgtgaagggtttggcc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 atgtcgtttatgaaaggagatttgctttctcgaaccagaaagcttgtgaagggtttggcc 284

                                                                       
Query: 61  aaggcagaacccgtgtggctcaaagccatggaacaagcgccacctgcaacatttcctcga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 aaggcagaacccgtgtggctcaaagccatggaacaagcgccacctgcaacatttcctcga 344

                                                                       
Query: 121 gctggggataaaattcagaccatcactcttcctgaggatgtttatgtgaaaaagttctat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 gctggggataaaattcagaccatcactcttcctgaggatgtttatgtgaaaaagttctat 404

                                                                       
Query: 181 aaaaaataccctgaatctaagtaccatgatccgatcaagttctgtgcttttgatccccct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 aaaaaataccctgaatctaagtaccatgatccgatcaagttctgtgcttttgatccccct 464

                                                                       
Query: 241 ccatctcgtctgtttgccttgagggttcttgagttgaaagagcatggcattagtgaggaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ccatctcgtctgtttgccttgagggttcttgagttgaaagagcatggcattagtgaggaa 524

                                                                       
Query: 301 caagcaatgtctgtagccgatacggaatatcgggctgagaagaaggcgaagaagcaggca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 caagcaatgtctgtagccgatacggaatatcgggctgagaagaaggcgaagaagcaggca 584

                                                                       
Query: 361 tataaacgtctgaaggaaattgctcatcttcaaggaaagagacctcctccaaacccatat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 tataaacgtctgaaggaaattgctcatcttcaaggaaagagacctcctccaaacccatat 644

                                                                       
Query: 421 cctaatcctatcaaggagatacaagctgaggagaggaaatatgttcgcgatcgtttcttt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 cctaatcctatcaaggagatacaagctgaggagaggaaatatgttcgcgatcgtttcttt 704

                                                                       
Query: 481 aatcccaagatacatgaaattgtgaagcaaaagaaagcagaggctgagagtttcagaagt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 aatcccaagatacatgaaattgtgaagcaaaagaaagcagaggctgagagtttcagaagt 764

                                   
Query: 541 ggattcagagggggtgattggtga 564
           ||||||||||||||||||||||||
Sbjct: 765 ggattcagagggggtgattggtga 788


>gnl|LJGI|AV770156 homologue to UniRef100_A7QSL4 Cluster: Chromosome undetermined
           scaffold_161, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_161,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (13%)
          Length = 554

 Score =  281 bits (142), Expect = 2e-75
 Identities = 145/146 (99%)
 Strand = Plus / Minus

                                                                       
Query: 419 atcctaatcctatcaaggagatacaagctgaggagaggaaatatgttcgcgatcgtttct 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 atcctaatcctatcaaggagatacaagctgaggagaggaaatatgttcgcgatcgtttct 495

                                                                       
Query: 479 ttaatcccaagatacatgaaattgtgaagcaaaagaaagcagaggctgagagtttcagaa 538
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 494 ttaatcccaagatacatgaaattgtgaagcaaaagcaagcagaggctgagagtttcagaa 435

                                     
Query: 539 gtggattcagagggggtgattggtga 564
           ||||||||||||||||||||||||||
Sbjct: 434 gtggattcagagggggtgattggtga 409