Miyakogusa Predicted Gene

Lj2g3v0044950.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v0044950.1 Non Chatacterized Hit- tr|I1K0Z9|I1K0Z9_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,61.4,0.00000000002,
,CUFF.34160.1
         (376 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68129 similar to UniRef100_A7NW67 Cluster: Chromosome...   363   e-100
gnl|LJGI|AV770629                                                      90   1e-17

>gnl|LJGI|TC68129 similar to UniRef100_A7NW67 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (6%)
          Length = 989

 Score =  363 bits (183), Expect = e-100
 Identities = 183/183 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaaattttattcaagggtgtagttgctactggtcttgcagcatatgctccatctgaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 atggaaattttattcaagggtgtagttgctactggtcttgcagcatatgctccatctgaa 766

                                                                       
Query: 61  gattcaagagactctcacggtcaaagcattggagtggaagagtcatttgatgctgatatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 gattcaagagactctcacggtcaaagcattggagtggaagagtcatttgatgctgatatt 826

                                                                       
Query: 121 gatgaggccgaaacagaagagcatgggattgaggtagaaatgacagcgcaaccatcatct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 gatgaggccgaaacagaagagcatgggattgaggtagaaatgacagcgcaaccatcatct 886

              
Query: 181 tca 183
           |||
Sbjct: 887 tca 889


>gnl|LJGI|AV770629 
          Length = 403

 Score = 89.7 bits (45), Expect = 1e-17
 Identities = 64/69 (92%), Gaps = 1/69 (1%)
 Strand = Plus / Minus

                                                                       
Query: 309 tgatcctgctaacatcaatgcatgtgtagagaggctaaagaatct-accagggctcactc 367
           |||||||||| ||||||||||||||||||||||| |||||||| | ||||||||||||||
Sbjct: 403 tgatcctgctcacatcaatgcatgtgtagagagggtaaagaatttaaccagggctcactc 344

                    
Query: 368 gtgggagtg 376
            ||||||||
Sbjct: 343 ttgggagtg 335