Miyakogusa Predicted Gene

Lj2g3v0039070.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v0039070.1 Non Chatacterized Hit- tr|D8T6J0|D8T6J0_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,44.59,4e-18,LysM domain,NULL; seg,NULL; no
description,NULL; LOC443603 PROTEIN-RELATED,NULL,CUFF.34099.1
         (1092 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|GO006240 similar to UniRef100_A7QEK9 Cluster: Chromosom...    52   7e-06

>gnl|LJGI|GO006240 similar to UniRef100_A7QEK9 Cluster: Chromosome chr17 scaffold_85,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_85, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (28%)
          Length = 655

 Score = 52.0 bits (26), Expect = 7e-06
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 196 atcaagtatggtgttgaggttgctgacgtcaaaaagatgaat 237
           |||||||||||||||||||| |||||| | |||| |||||||
Sbjct: 348 atcaagtatggtgttgaggtagctgacattaaaaggatgaat 389