Miyakogusa Predicted Gene

Lj2g3v0039060.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v0039060.1 Non Chatacterized Hit- tr|K3YS43|K3YS43_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si017087,34.71,8e-19,Glyco_transf_34,Galactosyl transferase;
seg,NULL; FAMILY NOT NAMED,NULL,CUFF.34096.1
         (709 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74088 similar to UniRef100_A7NW49 Cluster: Chromosome...   385   e-106

>gnl|LJGI|TC74088 similar to UniRef100_A7NW49 Cluster: Chromosome chr5 scaffold_2,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_2, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (18%)
          Length = 490

 Score =  385 bits (194), Expect = e-106
 Identities = 256/279 (91%), Gaps = 12/279 (4%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgctggagcagtgcttaggatctcgccgcctccgccagctgcagcgcgcctcgcgccgc 60
           |||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 atgctggaacggtgcttaggatctcgccgcctccgccagctgcagcgcgcctcgcgccgc 271

                                                                       
Query: 61  ggcttcctcaccttcctctgcctcttcctcactgtcatcgtgcttcgcggcaccatcgga 120
           |||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 272 ggcttcctcaccttcctctgcctcttcctcaccgtcatcatgcttcgcggcaccatcgga 331

                                                                       
Query: 121 gtcggcaagttcggaacccccgagcacgacctcgacgagatccgcca------------c 168
           | |||||||||||||||||||||||| ||||||||||||||||||||            |
Sbjct: 332 gccggcaagttcggaacccccgagcaggacctcgacgagatccgccaccacctcggccgc 391

                                                                       
Query: 169 cgcgtcgagcctcaccgcgtccttgaggaagttcaacccgaaaacaatgaccccaacagc 228
           ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| | |
Sbjct: 392 cgcgtcgagcctcaccgcgtccttgaggaagttcaacccgaaaacaacgaccccaataac 451

                                                  
Query: 229 tacgccaccttcgacatctccaagatccttgttgatgaa 267
           ||||||||||||||||||||||||||||| || ||||||
Sbjct: 452 tacgccaccttcgacatctccaagatcctcgtcgatgaa 490