Miyakogusa Predicted Gene
- Lj1g3v5062780.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v5062780.2 Non Chatacterized Hit- tr|I1JJD2|I1JJD2_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,93.43,0,PYRUVATE
DEHYDROGENASE E1 COMPONENT, BETA SUBUNIT,NULL; DEHYDROGENASE
RELATED,NULL; Thiamin diphosph,CUFF.34787.2
(600 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73465 homologue to UniRef100_A7QUS8 Cluster: Chromoso... 1179 0.0
gnl|LJGI|TC74549 similar to UniRef100_P52904 Cluster: Pyruvate d... 733 0.0
gnl|LJGI|TC65614 similar to UniRef100_A7R2A7 Cluster: Chromosome... 174 4e-43
gnl|LJGI|TC69377 similar to UniRef100_A7P2L3 Cluster: Chromosome... 155 4e-37
gnl|LJGI|TC72010 weakly similar to UniRef100_A7PNT3 Cluster: Chr... 129 2e-29
gnl|LJGI|TC82539 similar to UniRef100_A7P2L3 Cluster: Chromosome... 125 3e-28
>gnl|LJGI|TC73465 homologue to UniRef100_A7QUS8 Cluster: Chromosome chr1
scaffold_180, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr1 scaffold_180, whole genome
shotgun sequence - Vitis vinifera (Grape), complete
Length = 1651
Score = 1179 bits (595), Expect = 0.0
Identities = 598/599 (99%)
Strand = Plus / Plus
Query: 1 atgtggggtgttacaaggctcaagactatccgccctgctttctcttcactcagacaattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 atgtggggtgttacaaggctcaagactatccgccctgctttctcttcactcagacaattc 254
Query: 61 tcttccgtcgccaaagagatgacagtgagagaggctctcaactccgcacttgatgaggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 tcttccgtcgccaaagagatgacagtgagagaggctctcaactccgcacttgatgaggaa 314
Query: 121 atgtcagcagatcctaaagtcttcttgatgggtgaagaggttggagaatatcagggtgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 atgtcagcagatcctaaagtcttcttgatgggtgaagaggttggagaatatcagggtgca 374
Query: 181 tacaagataaccaagggtctgttggagaagtatggccctgagagggttcttgatactcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tacaagataaccaagggtctgttggagaagtatggccctgagagggttcttgatactcca 434
Query: 241 atcactgaggctgggtttactgggattggagttggcgctgcttactatggtctaagacct 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 435 atcactgaggctgggtttactgggattggagtaggcgctgcttactatggtctaagacct 494
Query: 301 gtcgtggagtttatgacatttaacttctccatgcaggcaatagatcacattattaattct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 gtcgtggagtttatgacatttaacttctccatgcaggcaatagatcacattattaattct 554
Query: 361 gctgcaaaatcaaactacatgtctgctgggcaaataaatgtacctattgtctttagagga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 gctgcaaaatcaaactacatgtctgctgggcaaataaatgtacctattgtctttagagga 614
Query: 421 cccaatggtgctgctgctggggttggtgctcaacactctcagtgttatgcatcttggtat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 cccaatggtgctgctgctggggttggtgctcaacactctcagtgttatgcatcttggtat 674
Query: 481 ggctcttgccctgggttgaaagtgctatcaccatactcatctgaagatgctcgtggtttg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 ggctcttgccctgggttgaaagtgctatcaccatactcatctgaagatgctcgtggtttg 734
Query: 541 cttaaagcagctataagggaccctgatcctgtagttttccttgaaaatgagttgttata 599
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 cttaaagcagctataagggaccctgatcctgtagttttccttgaaaatgagttgttata 793
>gnl|LJGI|TC74549 similar to UniRef100_P52904 Cluster: Pyruvate dehydrogenase E1
component subunit beta, mitochondrial precursor; n=1;
Pisum sativum|Rep: Pyruvate dehydrogenase E1 component
subunit beta, mitochondrial precursor - Pisum sativum
(Garden pea), partial (35%)
Length = 643
Score = 733 bits (370), Expect = 0.0
Identities = 389/394 (98%), Gaps = 1/394 (0%)
Strand = Plus / Plus
Query: 1 atgtggggtgttacaaggctcaagactatccgccctg-ctttctcttcactcagacaatt 59
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 250 atgtggggtgttacaaggctcaagactatccgccctggctttctcttcactcagacaatt 309
Query: 60 ctcttccgtcgccaaagagatgacagtgagagaggctctcaactccgcacttgatgagga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 ctcttccgtcgccaaagagatgacagtgagagaggctctcaactccgcacttgatgagga 369
Query: 120 aatgtcagcagatcctaaagtcttcttgatgggtgaagaggttggagaatatcagggtgc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aatgtcagcagatcctaaagtcttcttgatgggtgaagaggttggagaatatcagggtgc 429
Query: 180 atacaagataaccaagggtctgttggagaagtatggccctgagagggttcttgatactcc 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 atacaagataaccaagggtctgttggagaagtatggccctgagagggttcttgatactcc 489
Query: 240 aatcactgaggctgggtttactgggattggagttggcgctgcttactatggtctaagacc 299
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 490 aatcactgaggctgggttgactgggattggagtaggcgctgcttactatggtctaagacc 549
Query: 300 tgtcgtggagtttatgacatttaacttctccatgcaggcaatagatcacattattaattc 359
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 tgtcgtggagtatatgacatttaacttctccatgcaggcaatagatcacattattaattc 609
Query: 360 tgctgcaaaatcaaactacatgtctgctgggcaa 393
||||||||||||||||||| ||||||||||||||
Sbjct: 610 tgctgcaaaatcaaactacgtgtctgctgggcaa 643
>gnl|LJGI|TC65614 similar to UniRef100_A7R2A7 Cluster: Chromosome undetermined
scaffold_411, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_411,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (8%)
Length = 776
Score = 174 bits (88), Expect = 4e-43
Identities = 94/96 (97%)
Strand = Plus / Plus
Query: 77 agatgacagtgagagaggctctcaactccgcacttgatgaggaaatgtcagcagatccta 136
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 372 agatgacagtgagagaggctctcaactccgcacttgatgaggaaatgtcagcaaatccta 431
Query: 137 aagtcttcttgatgggtgaagaggttggagaatatc 172
|||||||||||||||||||||||||||| |||||||
Sbjct: 432 aagtcttcttgatgggtgaagaggttggggaatatc 467
>gnl|LJGI|TC69377 similar to UniRef100_A7P2L3 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 993
Score = 155 bits (78), Expect = 4e-37
Identities = 90/94 (95%)
Strand = Plus / Plus
Query: 156 agaggttggagaatatcagggtgcatacaagataaccaagggtctgttggagaagtatgg 215
||||||| | ||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 agaggtttgggaatatccgggtgcatacaagataaccaagggtctgttggagaagtatgt 185
Query: 216 ccctgagagggttcttgatactccaatcactgag 249
||||||||||||||||||||||||||||||||||
Sbjct: 186 ccctgagagggttcttgatactccaatcactgag 219
>gnl|LJGI|TC72010 weakly similar to UniRef100_A7PNT3 Cluster: Chromosome chr8
scaffold_23, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_23, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 1231
Score = 129 bits (65), Expect = 2e-29
Identities = 65/65 (100%)
Strand = Plus / Plus
Query: 185 agataaccaagggtctgttggagaagtatggccctgagagggttcttgatactccaatca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 agataaccaagggtctgttggagaagtatggccctgagagggttcttgatactccaatca 185
Query: 245 ctgag 249
|||||
Sbjct: 186 ctgag 190
>gnl|LJGI|TC82539 similar to UniRef100_A7P2L3 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 734
Score = 125 bits (63), Expect = 3e-28
Identities = 87/95 (91%)
Strand = Plus / Plus
Query: 156 agaggttggagaatatcagggtgcatacaagataaccaagggtctgttggagaagtatgg 215
||||||| | ||||||| ||| || ||| |||||||||||||||||||||||||||||
Sbjct: 118 agaggtttgggaatatcggggggcgtacgggataaccaagggtctgttggagaagtatgt 177
Query: 216 ccctgagagggttcttgatactccaatcactgagg 250
|||||||||||||||||||||||||||||||||||
Sbjct: 178 ccctgagagggttcttgatactccaatcactgagg 212