Miyakogusa Predicted Gene

Lj1g3v5062770.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v5062770.2 tr|A3KBV8|A3KBV8_LOTJA IGN1 OS=Lotus japonicus
GN=IGN1 PE=2 SV=1,36.97,9e-17,ANK_REPEAT,Ankyrin repeat;
ANK_REP_REGION,Ankyrin repeat-containing domain; no
description,Ankyrin r,CUFF.34034.2
         (747 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS325098 similar to UniRef100_A7QAZ9 Cluster: Chromosom...   297   5e-80
gnl|LJGI|TC72957 similar to UniRef100_A7QAZ9 Cluster: Chromosome...   103   2e-21

>gnl|LJGI|FS325098 similar to UniRef100_A7QAZ9 Cluster: Chromosome chr5 scaffold_72,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_72, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (8%)
          Length = 715

 Score =  297 bits (150), Expect = 5e-80
 Identities = 162/166 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggagaagcagctcagcttcatgggaagcgagagaaagaagagcaaggaatcacctgga 60
           ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 550 atggagaggcagctcagcttcatgggaagcgagaggaagaagagcaaggaatcacctgga 609

                                                                       
Query: 61  aaacgcggtgacttacccattcacttagcagctcgggctgggaacttgagtagagtaaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 610 aaacgcggtgacttacccattcacttagcagctcgggctgggaactttagtagagtaaaa 669

                                                         
Query: 121 gagataattcaatattgttctaattatgagtcaaaggatttgttgg 166
           |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 670 gagataattcaaaattgttctaattatgagtcaaaggatttgttgg 715


>gnl|LJGI|TC72957 similar to UniRef100_A7QAZ9 Cluster: Chromosome chr5 scaffold_72,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr5 scaffold_72, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (40%)
          Length = 700

 Score =  103 bits (52), Expect = 2e-21
 Identities = 52/52 (100%)
 Strand = Plus / Plus

                                                               
Query: 696 gggaaatacatgttgctgcaaagaagggtcgtactcagaacatcaatgaagg 747
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3   gggaaatacatgttgctgcaaagaagggtcgtactcagaacatcaatgaagg 54