Miyakogusa Predicted Gene

Lj1g3v5062690.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v5062690.2 Non Chatacterized Hit- tr|D8R6N5|D8R6N5_SELML
Putative uncharacterized protein OS=Selaginella
moelle,32.62,0.000000000000001,seg,NULL; coiled-coil,NULL,CUFF.34031.2
         (1146 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81926 similar to UniRef100_A7P6A2 Cluster: Chromosome...   329   2e-89
gnl|LJGI|TC77748                                                      228   6e-59

>gnl|LJGI|TC81926 similar to UniRef100_A7P6A2 Cluster: Chromosome chr9 scaffold_7,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr9 scaffold_7, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (28%)
          Length = 742

 Score =  329 bits (166), Expect = 2e-89
 Identities = 169/170 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgaaggtggtacaggagacttgctgctttgagtggcaaaatttaattgcagaagcttca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 573 atgaaggtggtacaggagacttgctgctttgagtggcaaaatttaattgcagaaggttca 632

                                                                       
Query: 61  aggcaaggctatgttggtcaggaagagctgcaatggaattcctatgaaatcttggatgaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 633 aggcaaggctatgttggtcaggaagagctgcaatggaattcctatgaaatcttggatgaa 692

                                                             
Query: 121 cagttgaagcaggagtggttggtgagtattgatcaaaggaaacgaatgcc 170
           ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 693 cagttgaagcaggagtggttggtgagtattgatcaaaggaaacgaatgcc 742


>gnl|LJGI|TC77748 
          Length = 530

 Score =  228 bits (115), Expect = 6e-59
 Identities = 115/115 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1032 tgtgatgggaactcagtctcttgaagatgggacactatctagatcacctactgtagtaac 1091
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    tgtgatgggaactcagtctcttgaagatgggacactatctagatcacctactgtagtaac 60

                                                                   
Query: 1092 tagaaagtgggttcgcggaaggctcgttgaagtggctgaagaggaaaaataaatt 1146
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   tagaaagtgggttcgcggaaggctcgttgaagtggctgaagaggaaaaataaatt 115