Miyakogusa Predicted Gene

Lj1g3v5062670.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v5062670.1 Non Chatacterized Hit- tr|E6RP18|E6RP18_PSEU9
Putative uncharacterized protein OS=Pseudoalteromonas
,28.07,4.3,seg,NULL,CUFF.34026.1
         (292 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC78742 weakly similar to UniRef100_Q9IGT7 Cluster: 163...   579   e-165
gnl|LJGI|BP036214 homologue to UniRef100_A9ERZ4 Cluster: Mechano...   396   e-110

>gnl|LJGI|TC78742 weakly similar to UniRef100_Q9IGT7 Cluster: 163R*; n=1; Porcine
            adenovirus 3|Rep: 163R* - Porcine adenovirus 3 (PAdV-3),
            partial (13%)
          Length = 1200

 Score =  579 bits (292), Expect = e-165
 Identities = 292/292 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1    atgtacaagtgtacagacaccagcaatcaattccaaatcaattcactatcagcacagaag 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1068 atgtacaagtgtacagacaccagcaatcaattccaaatcaattcactatcagcacagaag 1009

                                                                        
Query: 61   cttgcttcatcacctaaaaccgtccaactcttcattccactgtgtgctcaaatcccttca 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1008 cttgcttcatcacctaaaaccgtccaactcttcattccactgtgtgctcaaatcccttca 949

                                                                        
Query: 121  tactatatccacatatctacctcaatgaatagtagtagcagtacccatcctttaaactgt 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 948  tactatatccacatatctacctcaatgaatagtagtagcagtacccatcctttaaactgt 889

                                                                        
Query: 181  acagtgtcaacacttttacatatctccactacttcttctctgaactctgcaccattcctg 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888  acagtgtcaacacttttacatatctccactacttcttctctgaactctgcaccattcctg 829

                                                                
Query: 241  gagttccagattaatcccactgttgccacccatatcaaagtcagagtttgag 292
            ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828  gagttccagattaatcccactgttgccacccatatcaaagtcagagtttgag 777


>gnl|LJGI|BP036214 homologue to UniRef100_A9ERZ4 Cluster: Mechanosensitive ion channel
           family protein; n=1; Phaeobacter gallaeciensis
           2.10|Rep:, partial (1%)
          Length = 409

 Score =  396 bits (200), Expect = e-110
 Identities = 203/204 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtacaagtgtacagacaccagcaatcaattccaaatcaattcactatcagcacagaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 atgtacaagtgtacagacaccagcaatcaattccaaatcaattcactatcagcacagaag 265

                                                                       
Query: 61  cttgcttcatcacctaaaaccgtccaactcttcattccactgtgtgctcaaatcccttca 120
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 266 cttgcttcatcacctaaaaccgtccaactcttcattccactgggtgctcaaatcccttca 325

                                                                       
Query: 121 tactatatccacatatctacctcaatgaatagtagtagcagtacccatcctttaaactgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 tactatatccacatatctacctcaatgaatagtagtagcagtacccatcctttaaactgt 385

                                   
Query: 181 acagtgtcaacacttttacatatc 204
           ||||||||||||||||||||||||
Sbjct: 386 acagtgtcaacacttttacatatc 409