Miyakogusa Predicted Gene
- Lj1g3v5062660.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v5062660.1 Non Chatacterized Hit- tr|I1JS72|I1JS72_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.39925
PE,71.74,0,Pumilio-like repeats,Pumilio RNA-binding repeat; ARM
repeat,Armadillo-type fold; PUM,Pumilio RNA-bin,CUFF.34029.1
(2226 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71554 similar to UniRef100_A7P6A5 Cluster: Chromosome... 1061 0.0
gnl|LJGI|TC74042 similar to UniRef100_A7P6A5 Cluster: Chromosome... 779 0.0
>gnl|LJGI|TC71554 similar to UniRef100_A7P6A5 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 805
Score = 1061 bits (535), Expect = 0.0
Identities = 535/535 (100%)
Strand = Plus / Plus
Query: 107 caaacaaaggtggcggttcttccttccattccaacaaacgcaccttcactcccgcatctc 166
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 caaacaaaggtggcggttcttccttccattccaacaaacgcaccttcactcccgcatctc 330
Query: 167 gtgttaggaaacagattgaccctgaaacaactacctacttctcagaaatcgctaatcgac 226
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 gtgttaggaaacagattgaccctgaaacaactacctacttctcagaaatcgctaatcgac 390
Query: 227 ttgaaagtgaagaggttgaattggaggaacgctcacttatatgtgctaatgccctcgaag 286
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ttgaaagtgaagaggttgaattggaggaacgctcacttatatgtgctaatgccctcgaag 450
Query: 287 aaaccagaggaaaagaatttgaaattgctactgattatattctaagccacactcttgaaa 346
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 aaaccagaggaaaagaatttgaaattgctactgattatattctaagccacactcttgaaa 510
Query: 347 ccatcctccaaggctctgatgtagacagcctctgtgccttcctcaagacttgtgccaacg 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ccatcctccaaggctctgatgtagacagcctctgtgccttcctcaagacttgtgccaacg 570
Query: 407 acttcccctctattgccacggatcaatctggttcccatgtagcccagaccgccattaact 466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 acttcccctctattgccacggatcaatctggttcccatgtagcccagaccgccattaact 630
Query: 467 ctctagctcttcatcttcaagaccctctcgttgaggatgctttaaccatcatatgcaagg 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 ctctagctcttcatcttcaagaccctctcgttgaggatgctttaaccatcatatgcaagg 690
Query: 527 tgattgcagctaattctgttgatgtaatgtgtaactgttacggttctcacgtgcttcgaa 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 tgattgcagctaattctgttgatgtaatgtgtaactgttacggttctcacgtgcttcgaa 750
Query: 587 gtcttctttgcctttgtaaaggagtgccattggataagactggatactatatgtc 641
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 gtcttctttgcctttgtaaaggagtgccattggataagactggatactatatgtc 805
Score = 145 bits (73), Expect = 1e-33
Identities = 73/73 (100%)
Strand = Plus / Plus
Query: 1 atggtttccgttggttcgaaagcaatgggccaccacgttcacgactgtgaatcccacaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 atggtttccgttggttcgaaagcaatgggccaccacgttcacgactgtgaatcccacaga 224
Query: 61 cgtaacaagaaga 73
|||||||||||||
Sbjct: 225 cgtaacaagaaga 237
>gnl|LJGI|TC74042 similar to UniRef100_A7P6A5 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (11%)
Length = 802
Score = 779 bits (393), Expect = 0.0
Identities = 396/397 (99%)
Strand = Plus / Plus
Query: 1619 tagcactcaactcatcaggtgcttttaccattgaaaaatgcttcacttcctgtaatctgt 1678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tagcactcaactcatcaggtgcttttaccattgaaaaatgcttcacttcctgtaatctgt 60
Query: 1679 cactaagagaggcaatagtgtctgagatattggctgtccgaagtgagctttccaagacaa 1738
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cactaagagaggctatagtgtctgagatattggctgtccgaagtgagctttccaagacaa 120
Query: 1739 agcagggctcttacctattaaggagactagatgttgacggatatgttacaagtcctgatc 1798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agcagggctcttacctattaaggagactagatgttgacggatatgttacaagtcctgatc 180
Query: 1799 attggaggtcaaaacaaacatccaaagaatctacttacaaagatttctatgccacgtttg 1858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 attggaggtcaaaacaaacatccaaagaatctacttacaaagatttctatgccacgtttg 240
Query: 1859 gctccaatgatacaaagtcgtcaaaaactgatggctttctttctgacacttttagtaaat 1918
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gctccaatgatacaaagtcgtcaaaaactgatggctttctttctgacacttttagtaaat 300
Query: 1919 caaatccaaaaactgtaaaggaaatgagaaaagaaattgaccaatccctaggtcctgctg 1978
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caaatccaaaaactgtaaaggaaatgagaaaagaaattgaccaatccctaggtcctgctg 360
Query: 1979 catcatttctgagcacagatgggtttaagagaaaccc 2015
|||||||||||||||||||||||||||||||||||||
Sbjct: 361 catcatttctgagcacagatgggtttaagagaaaccc 397
Score = 335 bits (169), Expect = 7e-91
Identities = 178/181 (98%)
Strand = Plus / Plus
Query: 2046 tgctcaaattggtggcgatgatgataactccagtaggaaaagtaaaaggtctagaagggt 2105
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 428 tgctcaaattggtggcgatgatgataactcccgtaggaaaagtaaaaggtctagaagggt 487
Query: 2106 tgaaagtggagatgatattacctctaatccggcgtccaagaagactctaaagaaacggca 2165
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 488 tgaaagtggagatgatattacctctaatccggcgtcccagaagactctaaagaaacggcc 547
Query: 2166 aagagatggtgatgtatccgaggtttttgtgaagaaattgaaggcatcagataagtagag 2225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 aagagatggtgatgtatccgaggtttttgtgaagaaattgaaggcatcagataagtagag 607
Query: 2226 t 2226
|
Sbjct: 608 t 608