Miyakogusa Predicted Gene

Lj1g3v5061080.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v5061080.1 tr|B9MUL4|B9MUL4_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_676352 PE=4
SV=1,28.87,8e-18,seg,NULL; LRR,Leucine-rich repeat; LEURICHRPT,NULL;
LRR_4,Leucine rich repeat 4; LRR_8,NULL;
LRR_1,L,NODE_41305_length_2139_cov_72.396912.path1.1
         (1921 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV415057 similar to UniRef100_A7P692 Cluster: Chromosom...   198   9e-50
gnl|LJGI|AV408283 weakly similar to UniRef100_A7P692 Cluster: Ch...   135   1e-30

>gnl|LJGI|AV415057 similar to UniRef100_A7P692 Cluster: Chromosome chr9 scaffold_7,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr9 scaffold_7, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (10%)
          Length = 406

 Score =  198 bits (100), Expect = 9e-50
 Identities = 292/356 (82%)
 Strand = Plus / Plus

                                                                        
Query: 1543 cttacaggaaaatttcctacagagcttacaaggcttccagcactgacatctgagctggca 1602
            ||||| |||| |||||| || ||||| ||||| || |||||||| |||||  | | ||||
Sbjct: 6    cttaccggaacatttccgacggagctgacaagactcccagcactaacatcacaacaggca 65

                                                                        
Query: 1603 tatgataaagcagaaaggacttacctggagttacccctatttgctaatgccaacaatgtt 1662
             ||||||||| ||||||||||||| ||||||||||  | |||||||||||||||||||||
Sbjct: 66   aatgataaagtagaaaggacttacttggagttacctgtgtttgctaatgccaacaatgtt 125

                                                                        
Query: 1663 tcccagctgcaatattatcagctttcgaacctgcctccagcattatatgtgggaaacaat 1722
            ||||   |||||||  |||||||||| | ||| || |||||||| ||| |   |||||||
Sbjct: 126  tccctattgcaatacaatcagctttctagccttccaccagcattgtatctcaaaaacaat 185

                                                                        
Query: 1723 agcctcagtggcagtatccccatcgatattgggaaactgaaagtccttcatcaccttgat 1782
             |||| || ||||||||||| || || |||||  ||||||  ||||||||||| || || 
Sbjct: 186  cgccttagcggcagtatcccgattgagattggccaactgagtgtccttcatcagctggac 245

                                                                        
Query: 1783 ctcagttgtaacaaattctctggcaatatcccagttcaaatttctaacttgactaactta 1842
            || |     ||||| ||||| |||||||| || ||||||||||| |||||||| || |||
Sbjct: 246  ctgaagaacaacaacttctccggcaatataccggttcaaatttcaaacttgaccaattta 305

                                                                    
Query: 1843 gagaaactatacctctcaggaaaccaactatctggtaaaattcctgcttctctcaa 1898
            |||| |||| |||||||||||||||| ||||||||| ||||||||| ||| |||||
Sbjct: 306  gagacactagacctctcaggaaaccacctatctggtgaaattcctgattcactcaa 361


>gnl|LJGI|AV408283 weakly similar to UniRef100_A7P692 Cluster: Chromosome chr9
           scaffold_7, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr9 scaffold_7, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (8%)
          Length = 407

 Score =  135 bits (68), Expect = 1e-30
 Identities = 274/342 (80%), Gaps = 3/342 (0%)
 Strand = Plus / Plus

                                                                       
Query: 526 gggagtttgatatcttttaatgttagtaaaaacagcttcacaggtcaaattcccacttct 585
           ||||||||||||||||| ||||| || || ||||| |||||||| ||||| |||||||| 
Sbjct: 60  gggagtttgatatctttcaatgtcagcaacaacagtttcacaggccaaatccccacttca 119

                                                                       
Query: 586 ctcctttgcagtaaagacaacaacaacaactcatcgtctctcagattcttggatttttcc 645
            || ||||||  || |||  ||||      || || ||| ||||||||||||||| ||| 
Sbjct: 120 atcttttgcaccaatgaccgcaactcg---tcgtcttctatcagattcttggattattct 176

                                                                       
Query: 646 tacaaccattttgatggcaggattcagcctggactaggagcatgttcccagctggagaaa 705
           | |||  ||||||||||     |||||||||||||||||||||||||| | |||||||  
Sbjct: 177 ttcaatgattttgatggtgtcgttcagcctggactaggagcatgttccaatctggagagg 236

                                                                       
Query: 706 tttcgagcaggtttcaattcactgcatggtcctcttcccactgatatttttcatactgtt 765
           |||||||||||||||||||  ||    || ||| ||||   |||||||||| || |||| 
Sbjct: 237 tttcgagcaggtttcaattttctatccgggcctattcctgttgatatttttgatgctgtc 296

                                                                       
Query: 766 gctctcaaagaaatatcattgcccctcaataaattcactggaaccattgctgatgatata 825
            |||| |||||||||||| |||||||||||||  |||||||||  |||| |||||  || 
Sbjct: 297 tctcttaaagaaatatcactgcccctcaataagctcactggaagaattggtgatggcatt 356

                                                     
Query: 826 gctaacctgaccaacctcacagttttggagctctactccaat 867
           | || ||| ||||| ||||||||||||||||| |||||||||
Sbjct: 357 gttagcctcaccaatctcacagttttggagctttactccaat 398