Miyakogusa Predicted Gene
- Lj1g3v5061000.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v5061000.1 Non Chatacterized Hit- tr|I1JS56|I1JS56_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,78.92,0,DCL4
(DICER-LIKE 4), RNA BINDING / RIBONUCLEASE III,NULL;
HELICASE-RELATED,NULL; dsRNA_bind,Dicer do,CUFF.33963.1
(4044 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68118 homologue to UniRef100_Q2HTA7 Cluster: Helicase... 1824 0.0
>gnl|LJGI|TC68118 homologue to UniRef100_Q2HTA7 Cluster: Helicase, C-terminal;
Argonaute and Dicer protein, PAZ; Ribonuclease III,
bacterial; n=1; Medicago truncatula|Rep: Helicase,
C-terminal; Argonaute and Dicer protein, PAZ;
Ribonuclease III, bacterial - Medicago truncatula (Barrel
medic), partial (16%)
Length = 932
Score = 1824 bits (920), Expect = 0.0
Identities = 929/932 (99%)
Strand = Plus / Plus
Query: 2345 aatgcaatgttgttattcgctttgaccttgcaaagactgttctagcatacattcaatcta 2404
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 aatgcaatgttgttattcgctttgaccttgcaaagactgttttagcatacattcaatcta 60
Query: 2405 ggggccgtgctagaaagcctggttctgattacatcctgatggttgagagggggaatttgt 2464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggggccgtgctagaaagcctggttctgattacatcctgatggttgagagggggaatttgt 120
Query: 2465 cacatgaagcattcctaaggaatgccaggaacagtgaggaaactttgcgcaaagaagcaa 2524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cacatgaagcattcctaaggaatgccaggaacagtgaggaaactttgcgcaaagaagcaa 180
Query: 2525 tagagagaacagacctcagtcatctgaaagacacttcaaggttgatttctgtagaaaccc 2584
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 181 tagagagaacagacctcagtcatttgaaagacacttcaaggttgatttctgtagaaaccc 240
Query: 2585 agcctggaacagtttaccaggtgaagtcaaccggtgcagtcgtgagcttaaattctgctg 2644
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 241 agcctggaacagtttaccaggtgaagtcaaccggtgcagtcgtgagcttaaattttgctg 300
Query: 2645 taggtcttgtccacttctactgctctcagctacctagtgacagatattcaattcttcgtc 2704
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 taggtcttgtccacttctactgctctcagctacctagtgacagatattcaattcttcgtc 360
Query: 2705 ctgagtttattatggagaggcatgaaaaacctgacggtcctactgaatattcttgcaagc 2764
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctgagtttattatggagaggcatgaaaaacctgacggtcctactgaatattcttgcaagc 420
Query: 2765 ttcaactgccatgtaatgcaccatttgaatatctagagggtcctatctgcagttcaatgc 2824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttcaactgccatgtaatgcaccatttgaatatctagagggtcctatctgcagttcaatgc 480
Query: 2825 gcctggcacaacaggctgtttgtttggctgcttgcaagaaactgcatgagatgggagcct 2884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gcctggcacaacaggctgtttgtttggctgcttgcaagaaactgcatgagatgggagcct 540
Query: 2885 tcactgacatgctattacctgataaaggaagcgggggagaaaaagaaaaggctgagcaaa 2944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tcactgacatgctattacctgataaaggaagcgggggagaaaaagaaaaggctgagcaaa 600
Query: 2945 atgatgaaggagatccccttccggggactgctagacacagggagttctatcctgaaggtg 3004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atgatgaaggagatccccttccggggactgctagacacagggagttctatcctgaaggtg 660
Query: 3005 tggctgacatactgaagggagaatggatcttatctggaaaggatgcttgcaagagctcca 3064
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tggctgacatactgaagggagaatggatcttatctggaaaggatgcttgcaagagctcca 720
Query: 3065 aatcgcttcatctttttatgtacgttgtgaagtgtgaaaatataggccagtcaaaggatc 3124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 aatcgcttcatctttttatgtacgttgtgaagtgtgaaaatataggccagtcaaaggatc 780
Query: 3125 cattcttgactcaagtttcagattttgcagttctttttggcaatgagctggatgcagagg 3184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 cattcttgactcaagtttcagattttgcagttctttttggcaatgagctggatgcagagg 840
Query: 3185 tgttatcgatgtcaatggatctatttatcgcacgaaccgtgactacaaaggcatctcttg 3244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 tgttatcgatgtcaatggatctatttatcgcacgaaccgtgactacaaaggcatctcttg 900
Query: 3245 tctttggagggtcgataagtatcactgagagt 3276
||||||||||||||||||||||||||||||||
Sbjct: 901 tctttggagggtcgataagtatcactgagagt 932