Miyakogusa Predicted Gene
- Lj1g3v5060970.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v5060970.1 tr|E3M1D6|E3M1D6_CAERE CRE-RSR-2 protein
OS=Caenorhabditis remanei GN=Cre-rsr-2 PE=4 SV=1,37.41,3e-18,seg,NULL;
coiled-coil,NULL; cwf21,mRNA splicing factor, Cwf21,CUFF.33985.1
(2463 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO026408 similar to UniRef100_A7P547 Cluster: Chromosom... 977 0.0
gnl|LJGI|TC62721 similar to UniRef100_A7P547 Cluster: Chromosome... 696 0.0
gnl|LJGI|GO029359 UniRef100_Q4STL7 Cluster: Chromosome undetermi... 331 1e-89
>gnl|LJGI|GO026408 similar to UniRef100_A7P547 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 611
Score = 977 bits (493), Expect = 0.0
Identities = 493/493 (100%)
Strand = Plus / Plus
Query: 1 atgtataacggaatagggttacagaccccaagaggctcgggtaccaatggttacattcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 atgtataacggaatagggttacagaccccaagaggctcgggtaccaatggttacattcag 178
Query: 61 agcaacaagttcttcgtgaggcccaagactaccaaggtttctgacaacaccaaaggattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 agcaacaagttcttcgtgaggcccaagactaccaaggtttctgacaacaccaaaggattt 238
Query: 121 gaggcagatcagggaactgctggtgttaccaggaagcccaacaaagagatcctcgaccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 gaggcagatcagggaactgctggtgttaccaggaagcccaacaaagagatcctcgaccat 298
Query: 181 gatcgcaagcgtcagattcaactcaagctcgtcatcctcgaagacaagctcaccgatcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gatcgcaagcgtcagattcaactcaagctcgtcatcctcgaagacaagctcaccgatcag 358
Query: 241 ggttacactgactctgagattgccgagaaacttgaggaggctcgggcgaacctggaagcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ggttacactgactctgagattgccgagaaacttgaggaggctcgggcgaacctggaagcc 418
Query: 301 gccgctgctgctgaggacgaaactgatggaggatccaattcggataaaaagatttctgat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gccgctgctgctgaggacgaaactgatggaggatccaattcggataaaaagatttctgat 478
Query: 361 acacagactcaccaaattgctgctagaaaggaaaagcagatggagacattgaaagctgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 acacagactcaccaaattgctgctagaaaggaaaagcagatggagacattgaaagctgct 538
Query: 421 cttggcatagtttcagctgaagtccaggaagatgggattgatgatgggccaggaaatgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 cttggcatagtttcagctgaagtccaggaagatgggattgatgatgggccaggaaatgat 598
Query: 481 ggaaaagttggtg 493
|||||||||||||
Sbjct: 599 ggaaaagttggtg 611
>gnl|LJGI|TC62721 similar to UniRef100_A7P547 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 679
Score = 696 bits (351), Expect = 0.0
Identities = 351/351 (100%)
Strand = Plus / Plus
Query: 1 atgtataacggaatagggttacagaccccaagaggctcgggtaccaatggttacattcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 atgtataacggaatagggttacagaccccaagaggctcgggtaccaatggttacattcag 196
Query: 61 agcaacaagttcttcgtgaggcccaagactaccaaggtttctgacaacaccaaaggattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 agcaacaagttcttcgtgaggcccaagactaccaaggtttctgacaacaccaaaggattt 256
Query: 121 gaggcagatcagggaactgctggtgttaccaggaagcccaacaaagagatcctcgaccat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 gaggcagatcagggaactgctggtgttaccaggaagcccaacaaagagatcctcgaccat 316
Query: 181 gatcgcaagcgtcagattcaactcaagctcgtcatcctcgaagacaagctcaccgatcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gatcgcaagcgtcagattcaactcaagctcgtcatcctcgaagacaagctcaccgatcag 376
Query: 241 ggttacactgactctgagattgccgagaaacttgaggaggctcgggcgaacctggaagcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ggttacactgactctgagattgccgagaaacttgaggaggctcgggcgaacctggaagcc 436
Query: 301 gccgctgctgctgaggacgaaactgatggaggatccaattcggataaaaag 351
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gccgctgctgctgaggacgaaactgatggaggatccaattcggataaaaag 487
>gnl|LJGI|GO029359 UniRef100_Q4STL7 Cluster: Chromosome undetermined SCAF14148, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14148,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer), partial (8%)
Length = 167
Score = 331 bits (167), Expect = 1e-89
Identities = 167/167 (100%)
Strand = Plus / Minus
Query: 575 aagttcaaaaagatgaaaatgctaagaagggtcttaaagactcaagacaccacaagaagg 634
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 167 aagttcaaaaagatgaaaatgctaagaagggtcttaaagactcaagacaccacaagaagg 108
Query: 635 gtgaagctcgcaaaagaaagtatgaggatgattcatctgattcagacagcagtagagata 694
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 gtgaagctcgcaaaagaaagtatgaggatgattcatctgattcagacagcagtagagata 48
Query: 695 atgagaagggacctagaaggaagcacgatagggagaatacggacagc 741
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 47 atgagaagggacctagaaggaagcacgatagggagaatacggacagc 1