Miyakogusa Predicted Gene
- Lj1g3v5060720.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v5060720.1 tr|A9SNI1|A9SNI1_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_165894,30.95,4e-19,seg,NULL; DUF4308,Domain of unknown
function DUF4308,CUFF.33970.1
(510 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57696 similar to UniRef100_A7PXU4 Cluster: Chromosome... 1011 0.0
gnl|LJGI|TC60609 similar to UniRef100_A7PXU4 Cluster: Chromosome... 218 3e-56
>gnl|LJGI|TC57696 similar to UniRef100_A7PXU4 Cluster: Chromosome chr15 scaffold_37,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_37, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (90%)
Length = 855
Score = 1011 bits (510), Expect = 0.0
Identities = 510/510 (100%)
Strand = Plus / Plus
Query: 1 atggcctcaacctcctcccccaccctctctatatcctcttcatccacctttgttgatggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 atggcctcaacctcctcccccaccctctctatatcctcttcatccacctttgttgatggc 135
Query: 61 aaggctccaagacaatcaccaactgcttccacacagtgtgtgagccttcccactctcccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 aaggctccaagacaatcaccaactgcttccacacagtgtgtgagccttcccactctcccc 195
Query: 121 cctccacctgtgcagcctcagactcgcccatggaaggccactgctttttgtcgcaaggtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 cctccacctgtgcagcctcagactcgcccatggaaggccactgctttttgtcgcaaggtt 255
Query: 181 gcgcgcaatgttatggcaatggctaccacaagtgaggcaccaacaacagaaactgtcacc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gcgcgcaatgttatggcaatggctaccacaagtgaggcaccaacaacagaaactgtcacc 315
Query: 241 actgaactcaatgggggtgagctgccagaatttgtgaagactattcaagaagcttgggac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 actgaactcaatgggggtgagctgccagaatttgtgaagactattcaagaagcttgggac 375
Query: 301 aaagttgaagacaaatatgcagtgagttcactaggtgtagctggttttgttgcattatgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 aaagttgaagacaaatatgcagtgagttcactaggtgtagctggttttgttgcattatgg 435
Query: 361 ggctcagctggggtgatctcagcaattgataggattccattagttcctggggtacttgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ggctcagctggggtgatctcagcaattgataggattccattagttcctggggtacttgag 495
Query: 421 gttgtaggcattggctacactgggtggtttgcttacaagaacctagttttcaagcctgac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gttgtaggcattggctacactgggtggtttgcttacaagaacctagttttcaagcctgac 555
Query: 481 cgggaagctctgtttcggaaagtaaaagaa 510
||||||||||||||||||||||||||||||
Sbjct: 556 cgggaagctctgtttcggaaagtaaaagaa 585
>gnl|LJGI|TC60609 similar to UniRef100_A7PXU4 Cluster: Chromosome chr15 scaffold_37,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_37, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (84%)
Length = 834
Score = 218 bits (110), Expect = 3e-56
Identities = 200/230 (86%)
Strand = Plus / Plus
Query: 258 tgagctgccagaatttgtgaagactattcaagaagcttgggacaaagttgaagacaaata 317
|||||||||||| |||||||||| | |||||||| |||||||||||||||| ||||||||
Sbjct: 252 tgagctgccagagtttgtgaagaatcttcaagaaacttgggacaaagttgatgacaaata 311
Query: 318 tgcagtgagttcactaggtgtagctggttttgttgcattatggggctcagctggggtgat 377
||||||| ||||| | | ||||||| | | ||||||| |||| ||| ||||| || |
Sbjct: 312 tgcagtgggttcagtggttgtagcttctgtgcttgcattgtgggcttcaactgggttgct 371
Query: 378 ctcagcaattgataggattccattagttcctggggtacttgaggttgtaggcattggcta 437
|||||||||||||| | |||| || |||||||||| |||||| ||||||||||||||||
Sbjct: 372 ctcagcaattgataagcttcctttgattcctggggttcttgagcttgtaggcattggcta 431
Query: 438 cactgggtggtttgcttacaagaacctagttttcaagcctgaccgggaag 487
||||||||||||||| ||||||||||| ||||||||||| ||||||||||
Sbjct: 432 cactgggtggtttgcatacaagaacctggttttcaagccagaccgggaag 481
Score = 52.0 bits (26), Expect = 3e-06
Identities = 89/110 (80%)
Strand = Plus / Plus
Query: 1 atggcctcaacctcctcccccaccctctctatatcctcttcatccacctttgttgatggc 60
|||||| ||||||||||| | | ||| |||||||||| ||||||||| | |||| |||
Sbjct: 43 atggccgcaacctcctcctctgctctcactatatcctcctcatccaccctccttgacggc 102
Query: 61 aaggctccaagacaatcaccaactgcttccacacagtgtgtgagccttcc 110
||||||||| | ||| |||| |||| || |||| ||||||||| ||||
Sbjct: 103 aaggctccacggcaaccaccgtctgcctctccacaatgtgtgagctttcc 152