Miyakogusa Predicted Gene

Lj1g3v5060560.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v5060560.1 Non Chatacterized Hit- tr|E0CVC0|E0CVC0_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,64.86,4e-19,60S
ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER,NULL; Ribosomal_60s,Ribosomal
protein 60S; seg,NULL,CUFF.34230.1
         (336 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC68487 weakly similar to UniRef100_Q5I7K5 Cluster: Rib...   666   0.0  
gnl|LJGI|TC66756 weakly similar to UniRef100_Q307Z7 Cluster: Aci...   666   0.0  
gnl|LJGI|TC67241 similar to UniRef100_A7QEW1 Cluster: Chromosome...    62   2e-09

>gnl|LJGI|TC68487 weakly similar to UniRef100_Q5I7K5 Cluster: Ribosomal protein P1;
           n=1; Triticum aestivum|Rep: Ribosomal protein P1 -
           Triticum aestivum (Wheat), complete
          Length = 588

 Score =  666 bits (336), Expect = 0.0
 Identities = 336/336 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcgctcggagagactgcttgctcctacgcccttctcatccttgaggatgataaaatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 112 atgtcgctcggagagactgcttgctcctacgcccttctcatccttgaggatgataaaatc 171

                                                                       
Query: 61  gctgctactgctgataacatctctaccttgttgaagacggcaaatgttaaggtagaatcg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 gctgctactgctgataacatctctaccttgttgaagacggcaaatgttaaggtagaatcg 231

                                                                       
Query: 121 tattgggcacccttatttgctaaacttgctgagaagaagaatcttcaggatttgattgcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 232 tattgggcacccttatttgctaaacttgctgagaagaagaatcttcaggatttgattgcc 291

                                                                       
Query: 181 agtgctgctggcggtggtggttcagttgctgttgcagctgccccagttgctgctgcatct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 agtgctgctggcggtggtggttcagttgctgttgcagctgccccagttgctgctgcatct 351

                                                                       
Query: 241 ggtggcgcttctgctgctgctccagttgaggagaaaaaggaagaacccaaggaagagagt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ggtggcgcttctgctgctgctccagttgaggagaaaaaggaagaacccaaggaagagagt 411

                                               
Query: 301 gacgatgatatgggattcagcctgtttgattaggaa 336
           ||||||||||||||||||||||||||||||||||||
Sbjct: 412 gacgatgatatgggattcagcctgtttgattaggaa 447


>gnl|LJGI|TC66756 weakly similar to UniRef100_Q307Z7 Cluster: Acidic ribosomal
           protein P1a-like; n=1; Solanum tuberosum|Rep: Acidic
           ribosomal protein P1a-like - Solanum tuberosum (Potato),
           partial (98%)
          Length = 770

 Score =  666 bits (336), Expect = 0.0
 Identities = 336/336 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcgctcggagagactgcttgctcctacgcccttctcatccttgaggatgataaaatc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 atgtcgctcggagagactgcttgctcctacgcccttctcatccttgaggatgataaaatc 174

                                                                       
Query: 61  gctgctactgctgataacatctctaccttgttgaagacggcaaatgttaaggtagaatcg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 175 gctgctactgctgataacatctctaccttgttgaagacggcaaatgttaaggtagaatcg 234

                                                                       
Query: 121 tattgggcacccttatttgctaaacttgctgagaagaagaatcttcaggatttgattgcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 235 tattgggcacccttatttgctaaacttgctgagaagaagaatcttcaggatttgattgcc 294

                                                                       
Query: 181 agtgctgctggcggtggtggttcagttgctgttgcagctgccccagttgctgctgcatct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 agtgctgctggcggtggtggttcagttgctgttgcagctgccccagttgctgctgcatct 354

                                                                       
Query: 241 ggtggcgcttctgctgctgctccagttgaggagaaaaaggaagaacccaaggaagagagt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 ggtggcgcttctgctgctgctccagttgaggagaaaaaggaagaacccaaggaagagagt 414

                                               
Query: 301 gacgatgatatgggattcagcctgtttgattaggaa 336
           ||||||||||||||||||||||||||||||||||||
Sbjct: 415 gacgatgatatgggattcagcctgtttgattaggaa 450


>gnl|LJGI|TC67241 similar to UniRef100_A7QEW1 Cluster: Chromosome chr16 scaffold_86,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr16 scaffold_86, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (94%)
          Length = 610

 Score = 61.9 bits (31), Expect = 2e-09
 Identities = 58/67 (86%)
 Strand = Plus / Plus

                                                                       
Query: 268 gaggagaaaaaggaagaacccaaggaagagagtgacgatgatatgggattcagcctgttt 327
           |||||||| ||||||||  | |||||||| ||||| ||||| |||||||||||| |||| 
Sbjct: 352 gaggagaagaaggaagaggcaaaggaagaaagtgatgatgacatgggattcagcttgttc 411

                  
Query: 328 gattagg 334
           |||||||
Sbjct: 412 gattagg 418