Miyakogusa Predicted Gene

Lj1g3v5035060.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v5035060.1 Non Chatacterized Hit- tr|F6I6F1|F6I6F1_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,70.59,3e-19,no
description,AP2/ERF domain; FAMILY NOT NAMED,NULL; seg,NULL;
AP2_ERF,AP2/ERF domain,NODE_82038_length_701_cov_19.256777.path1.1
         (359 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP036840 homologue to UniRef100_A9PL83 Cluster: TINY-li...   712   0.0  

>gnl|LJGI|BP036840 homologue to UniRef100_A9PL83 Cluster: TINY-like protein; n=1;
           Populus trichocarpa|Rep: TINY-like protein - Populus
           trichocarpa (Western balsam poplar) (Populus
           balsamiferasubsp. trichocarpa), partial (53%)
          Length = 584

 Score =  712 bits (359), Expect = 0.0
 Identities = 359/359 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcggcgaaggcatacgacgttgccgcgtactgcctcaaagggcggaaggcgcagctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 atggcggcgaaggcatacgacgttgccgcgtactgcctcaaagggcggaaggcgcagctc 248

                                                                       
Query: 61  aactttcccgacgaggtggaccgactgccggttccggctacctgcacggccagagacatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 aactttcccgacgaggtggaccgactgccggttccggctacctgcacggccagagacatt 308

                                                                       
Query: 121 caggcggctgcggctaaggcggcgagcatgatgtcgaaagccgccggtgagaaaagcagc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 caggcggctgcggctaaggcggcgagcatgatgtcgaaagccgccggtgagaaaagcagc 368

                                                                       
Query: 181 attgcgaccgacggagacatcggaggcggcgatgatttctggggtgagattgagttgccg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 attgcgaccgacggagacatcggaggcggcgatgatttctggggtgagattgagttgccg 428

                                                                       
Query: 241 gagctaatgtgttgctggagttctccgagcgggtcatcgtggaattcctccggtgacacc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gagctaatgtgttgctggagttctccgagcgggtcatcgtggaattcctccggtgacacc 488

                                                                      
Query: 301 acggcgtggccggaggttgagcttttgccgctgcaacccttcatggcgtgtctataatc 359
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 acggcgtggccggaggttgagcttttgccgctgcaacccttcatggcgtgtctataatc 547