Miyakogusa Predicted Gene

Lj1g3v5035000.1
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v5035000.1 Non Chatacterized Hit- tr|I1M781|I1M781_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,54.17,0.000001,
,NODE_58029_length_534_cov_10.827715.path1.1
         (186 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77083                                                      319   3e-87

>gnl|LJGI|TC77083 
          Length = 517

 Score =  319 bits (161), Expect = 3e-87
 Identities = 185/189 (97%), Gaps = 3/189 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgcatattcaggaagtgaagaagagagttcctcc-tgaattaaatacaat-gaaaaaca 58
           ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||
Sbjct: 431 atgcatattcaggaagtgaagaagagagttcctccgtgaattaaatacaattgaaaaaca 372

                                                                       
Query: 59  aagacggcaagacaccaatggatatgcttcatgctcatcatacaaatttatcaagtgaaa 118
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 aagacggcaagacaccaatggatatgcttcatgctcatcatacaaatttatcaagtgaaa 312

                                                                       
Query: 119 ttaaaga-cactgctaaaaaagtagccgaatctggtatggttcactaccacaaaaaaggg 177
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ttaaagagcactgctaaaaaagtagccgaatctggtatggttcactaccacaaaaaaggg 252

                    
Query: 178 gttgggtag 186
           || ||||||
Sbjct: 251 gtagggtag 243