Miyakogusa Predicted Gene
- Lj1g3v5034990.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v5034990.1 Non Chatacterized Hit- tr|I1NHW4|I1NHW4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.2903 PE=,75,8e-18,GroEL
apical domain-like,NULL; CHAPERONIN-60KDA, CH60,NULL;
CHAPERONIN,Chaperonin Cpn60/TCP-1; no
de,NODE_63419_length_412_cov_41.813107.path1.1
(303 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO011453 similar to UniRef100_P35480 Cluster: Chaperoni... 492 e-139
gnl|LJGI|TC75213 145 2e-34
gnl|LJGI|BP060021 111 2e-24
gnl|LJGI|BP068077 similar to UniRef100_Q026S7 Cluster: Tetratric... 88 4e-17
gnl|LJGI|TC62942 similar to UniRef100_Q93ZM7 Cluster: Chaperonin... 74 5e-13
>gnl|LJGI|GO011453 similar to UniRef100_P35480 Cluster: Chaperonin CPN60,
mitochondrial precursor; n=1; Brassica napus|Rep:
Chaperonin CPN60, mitochondrial precursor - Brassica
napus (Rape), partial (15%)
Length = 702
Score = 492 bits (248), Expect = e-139
Identities = 287/303 (94%), Gaps = 2/303 (0%)
Strand = Plus / Plus
Query: 1 atggatggcaaaccttttttcaatgagctggaagtagttgaaggaatgaagcttgacagg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 340 atggatggcaaaccttttttcaatgagctggaagtagttgaaggaatgaagcctgacagg 399
Query: 61 ggctacatatctccttatttcataacaaatcagaagaaccagaaacgtgaactggaggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ggctacatatctccttatttcataacaaatcagaagaaccagaaacgtgaactggaggat 459
Query: 121 tctctcattctaattcatgttgcagttaaagtcttagagttggctttgaagtggaagttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tctctcattctaattcatgttgcagttaaagtcttagagttggctttgaagtggaagttg 519
Query: 181 caagatttgttcaagtgttgcagagaagnnnnnnnnnnnnnngataggcagtgttgcaga 240
|||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 520 caagatttgttcaagtgttgcagagaag--ttttttttttttgataggcagtgttgcagc 577
Query: 241 gaagttgatatcactgggtggacaaagtctagcaacgctttggtgggggaagattcttga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 gaagttgatatcactgggtggacaaagtctagcaacgctttggtgggggaagattcttga 637
Query: 301 gag 303
|||
Sbjct: 638 gag 640
>gnl|LJGI|TC75213
Length = 519
Score = 145 bits (73), Expect = 2e-34
Identities = 79/81 (97%)
Strand = Plus / Plus
Query: 223 gataggcagtgttgcagagaagttgatatcactgggtggacaaagtctagcaacgctttg 282
||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct: 268 gataggcagtgttgcagagaagttgatatcactgggtggacgaagtctagctacgctttg 327
Query: 283 gtgggggaagattcttgagag 303
|||||||||||||||||||||
Sbjct: 328 gtgggggaagattcttgagag 348
>gnl|LJGI|BP060021
Length = 317
Score = 111 bits (56), Expect = 2e-24
Identities = 66/68 (97%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 237 cagagaagttgatatcac-tgggtggacaaagtctagcaacgctttggtgggggaagatt 295
|||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||
Sbjct: 227 cagagaagttgatatcacctgggtggaccaagtctagcaacgctttggtgggggaagatt 168
Query: 296 cttgagag 303
||||||||
Sbjct: 167 cttgagag 160
>gnl|LJGI|BP068077 similar to UniRef100_Q026S7 Cluster: Tetratricopeptide TPR_2 repeat
protein precursor; n=1; Solibacter usitatus
Ellin6076|Rep:, partial (2%)
Length = 368
Score = 87.7 bits (44), Expect = 4e-17
Identities = 77/84 (91%), Gaps = 3/84 (3%)
Strand = Plus / Minus
Query: 223 gataggcagtgtt-gcagagaagttgatatcactgggtggacaaag-tctagcaacgctt 280
||||||||||| | |||||||||||||||||||||| ||||| ||| |||||| ||||||
Sbjct: 228 gataggcagtgctcgcagagaagttgatatcactggctggaccaagctctagctacgctt 169
Query: 281 tg-gtgggggaagattcttgagag 303
|| |||||||||||||||||||||
Sbjct: 168 tgcgtgggggaagattcttgagag 145
>gnl|LJGI|TC62942 similar to UniRef100_Q93ZM7 Cluster: Chaperonin CPN60-like 2,
mitochondrial precursor; n=2; Brassicaceae|Rep:
Chaperonin CPN60-like 2, mitochondrial precursor -
Arabidopsis thaliana (Mouse-ear cress), partial (55%)
Length = 1212
Score = 73.8 bits (37), Expect = 5e-13
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 29 tggaagtagttgaaggaatgaagcttgacaggggctacatatctccttatttcataacaa 88
||||||| || |||||||||||||| | || |||||||||||||||||||| || ||
Sbjct: 704 tggaagtggtagaaggaatgaagctagctagaggctacatatctccttattttattactg 763
Query: 89 atcagaagaaccagaaacgtgaactggag 117
||||||||| ||||||| ||||| |||||
Sbjct: 764 atcagaagacccagaaatgtgaattggag 792