Miyakogusa Predicted Gene
- Lj1g3v5034750.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v5034750.1 tr|G7L436|G7L436_MEDTR Cyclic nucleotide-gated
channel C OS=Medicago truncatula GN=MTR_7g117310
PE=4,81.46,0,cAMP-binding domain-like,Cyclic nucleotide-binding-like;
Voltage-gated potassium channels,NULL; CYCL,CUFF.33953.1
(2103 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76617 similar to UniRef100_A7QTV4 Cluster: Chromosome... 634 0.0
gnl|LJGI|BP083853 similar to UniRef100_Q8H6U3 Cluster: Cyclic nu... 432 e-120
gnl|LJGI|TC58709 weakly similar to UniRef100_A7PZV0 Cluster: Chr... 305 6e-82
gnl|LJGI|TC65933 similar to UniRef100_O04182 Cluster: CaMB-chann... 232 7e-60
gnl|LJGI|TC68664 similar to UniRef100_Q8H6U1 Cluster: Cyclic nuc... 170 2e-41
gnl|LJGI|DC599928 62 1e-08
gnl|LJGI|TC64938 similar to UniRef100_A7QFZ6 Cluster: Chromosome... 54 4e-06
>gnl|LJGI|TC76617 similar to UniRef100_A7QTV4 Cluster: Chromosome undetermined
scaffold_171, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_171, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(4%)
Length = 1296
Score = 634 bits (320), Expect = 0.0
Identities = 329/332 (99%)
Strand = Plus / Plus
Query: 1 atgaatgcaaaggggcataaatttgtgaggtttggggactggaaatcagagtcatctttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 965 atgaatgcaaaggggcataaatttgtgaggtttggggactggaaatcagagtcatctttt 1024
Query: 61 agtatggagcaggaaggttctgtaaacaatggatatcacaagagaaaaggcataccgagt 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 agtatagagcaggaaggttctgtaaacaatggatatcacaagagaaaaggcataccgagt 1084
Query: 121 gtaagtgctattttgaagagtattggaagaagactcgagagtggaacagagaaagtgaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1085 gtaagtgctattttgaagagtattggaagaagactcgagagtggaacagagaaagtgaaa 1144
Query: 181 agcttgagaagacattccgctgctgtccatcctttaagtgatggaaagacaaaaaagccg 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1145 agcttgagaagacattctgctgctgtccatcctttaagtgatggaaagacaaaaaagccg 1204
Query: 241 acttccgggtgcaatattcttgatcctcaagggtcaatgcttcagaaatggaataaaata 300
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1205 acttctgggtgcaatattcttgatcctcaagggtcaatgcttcagaaatggaataaaata 1264
Query: 301 tttgtaatcacatgtgtgatggcagtttctgt 332
||||||||||||||||||||||||||||||||
Sbjct: 1265 tttgtaatcacatgtgtgatggcagtttctgt 1296
>gnl|LJGI|BP083853 similar to UniRef100_Q8H6U3 Cluster: Cyclic nucleotide-gated channel
A; n=1; Phaseolus vulgaris|Rep: Cyclic nucleotide-gated
channel A - Phaseolus vulgaris (Kidney bean) (French
bean), partial (25%)
Length = 437
Score = 432 bits (218), Expect = e-120
Identities = 218/218 (100%)
Strand = Plus / Minus
Query: 1886 aaacttgggctacatgtttcatacaagcagcttggcatagatattgtaaaaagaaaattg 1945
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aaacttgggctacatgtttcatacaagcagcttggcatagatattgtaaaaagaaaattg 378
Query: 1946 agaggacattgcgtgaagaagaagacaaactaaaaggtgttcttgcaattgagaatggat 2005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 agaggacattgcgtgaagaagaagacaaactaaaaggtgttcttgcaattgagaatggat 318
Query: 2006 ccactctaagccttggtgcaaccatatatgcatcaaagtttgctgcaaaggcattacgaa 2065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ccactctaagccttggtgcaaccatatatgcatcaaagtttgctgcaaaggcattacgaa 258
Query: 2066 acttgagagaaaatagcagacaaagcagaacgccacag 2103
||||||||||||||||||||||||||||||||||||||
Sbjct: 257 acttgagagaaaatagcagacaaagcagaacgccacag 220
>gnl|LJGI|TC58709 weakly similar to UniRef100_A7PZV0 Cluster: Chromosome chr15
scaffold_40, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr15 scaffold_40, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (21%)
Length = 771
Score = 305 bits (154), Expect = 6e-82
Identities = 400/482 (82%)
Strand = Plus / Plus
Query: 259 cttgatcctcaagggtcaatgcttcagaaatggaataaaatatttgtaatcacatgtgtg 318
|||||||| ||||| ||| | |||||||||||||| ||||| |||||||| || ||||||
Sbjct: 284 cttgatccacaaggttcactacttcagaaatggaacaaaatttttgtaataacctgtgtg 343
Query: 319 atggcagtttctgtggatccgctgttcttttacattccagtgattgttggtaaaaacaag 378
|||||| | |||||||| || ||||||||||||| || ||||||| || || | |||
Sbjct: 344 atggcaatctctgtggaccctttgttcttttacatccctgtgattgatgacaagaggaag 403
Query: 379 tgtcttgatttagatggagcattgcagattactgccagtgttctacgcactttctttgat 438
|| |||||||| ||||||||| || |||||||||| ||||| | ||||| |||||||||
Sbjct: 404 tgccttgatttggatggagcactgaagattactgctggtgtttttcgcacgttctttgat 463
Query: 439 ctgttctacattcttcacataatctttcagtttcaaacggggtttattgctccttcttct 498
|| ||||||||||||| ||| ||||||||||||| ||| ||||| ||||| ||||||||
Sbjct: 464 cttttctacattcttcgcatcatctttcagtttcgaaccgggttcattgccccttcttca 523
Query: 499 cgtgttttcgggaggggtgagctggttgaggatcctgtggccataatgaaaagatactta 558
||||| || || ||||||||||||||||| |||||| |||||| ||| ||||||||
Sbjct: 524 cgtgtatttggaaggggtgagctggttgatgatcctcgagccatagtgatgagatacttg 583
Query: 559 agttcacacttcatcattgacattctatcaattattccacttccacaggtgcttgtttta 618
||||| |||||||||||||||||||||||||||||||||||||| ||| || | |||||
Sbjct: 584 agttctcacttcatcattgacattctatcaattattccacttcctcagatggtcatttta 643
Query: 619 gctgtagttccaaacctgaaaaactcatatccatttctagcaaaggatttgttgaagtat 678
||| | |||||| || ||| |||| ||||| ||| | |||||||||||||||||||
Sbjct: 644 gctcttattccaatcccaaaatgctcagctccatatctggaaaaggatttgttgaagtat 703
Query: 679 acaataataatccagttaattccgaggcttctgcggatccgtccactattcaaagaagta 738
||| ||||| |||| || || || ||| || ||||| |||||| ||||||||||||
Sbjct: 704 acagtaatagctcagtatataccaagacttttgaggatctatccactgttcaaagaagta 763
Query: 739 ac 740
||
Sbjct: 764 ac 765
>gnl|LJGI|TC65933 similar to UniRef100_O04182 Cluster: CaMB-channel protein; n=1;
Nicotiana tabacum|Rep: CaMB-channel protein - Nicotiana
tabacum (Common tobacco), partial (45%)
Length = 769
Score = 232 bits (117), Expect = 7e-60
Identities = 234/273 (85%)
Strand = Plus / Plus
Query: 1698 aacatgggctttggatcctaattcctcctcaaatctaccaacttcaacaagaacagtcca 1757
||||||||| |||||||| || |||||||||| ||||| | |||||| |||||||| |
Sbjct: 1 aacatgggccttggatccaaacacctcctcaaacctacccatttcaactagaacagtgga 60
Query: 1758 aacaatttcagaagtcgaagcctttgctctcatggctgatgacttgaagtttgttgcttc 1817
||| ||||||||||| |||||||||||||||||| |||||||||||||||||||| ||||
Sbjct: 61 aactatttcagaagttgaagcctttgctctcatgcctgatgacttgaagtttgttacttc 120
Query: 1818 ccaatttcgacgtctatttaacagcaaacagctccagcacactttcaggttctattcccc 1877
|||||||||||| || | |||||||| || ||||||||||||||||||||||| |||
Sbjct: 121 ccaatttcgacgccttataaacagcaaccaactccagcacactttcaggttctactcctt 180
Query: 1878 acaatggaaaacttgggctacatgtttcatacaagcagcttggcatagatattgtaaaaa 1937
|||||||| || |||||| | |||||||||||||||||||||| ||||| | |||||
Sbjct: 181 acaatggaggacatgggctgcctgtttcatacaagcagcttggcgtagatgcaggaaaaa 240
Query: 1938 gaaaattgagaggacattgcgtgaagaagaaga 1970
||| | ||||||| ||| ||||||| ||||||
Sbjct: 241 gaagactgagaggttattacgtgaagcagaaga 273
>gnl|LJGI|TC68664 similar to UniRef100_Q8H6U1 Cluster: Cyclic nucleotide-gated channel
C; n=1; Phaseolus vulgaris|Rep: Cyclic nucleotide-gated
channel C - Phaseolus vulgaris (Kidney bean) (French
bean), partial (35%)
Length = 834
Score = 170 bits (86), Expect = 2e-41
Identities = 208/248 (83%), Gaps = 3/248 (1%)
Strand = Plus / Plus
Query: 1669 gctggtgacttctgtggagaggagcttctaacatgggctttggatcctaattcctcctca 1728
||||||||||||||||||||||||||||| |||||||| || |||||| ||||||| ||
Sbjct: 105 gctggtgacttctgtggagaggagcttctcacatgggcattagatcctcattcctcatcc 164
Query: 1729 aatctaccaacttcaacaagaacagtccaaacaatttcagaagtcgaagcctttgctctc 1788
|| || || | ||||||||||| |||||||| || ||||||| ||||||||||||||
Sbjct: 165 aacctccccatctcaacaagaactgtccaaactcttgcagaagtggaagcctttgctctg 224
Query: 1789 atggctgatgacttgaagtttgttgcttcccaatttcgacgtctatttaacagcaaacag 1848
| |||||||||||||||||||| || || ||||| || |||| || ||||||| |||
Sbjct: 225 aaagctgatgacttgaagtttgtcgcgtctcaattccggcgtc---ttcacagcaagcag 281
Query: 1849 ctccagcacactttcaggttctattccccacaatggaaaacttgggctacatgtttcata 1908
|| | ||||||||||||||||| || | ||||||| ||||||||| |||| ||||||
Sbjct: 282 cttcgccacactttcaggttctactcacaacaatggcgcacttgggctgcatgcttcata 341
Query: 1909 caagcagc 1916
||||||||
Sbjct: 342 caagcagc 349
>gnl|LJGI|DC599928
Length = 363
Score = 61.9 bits (31), Expect = 1e-08
Identities = 31/31 (100%)
Strand = Plus / Plus
Query: 1 atgaatgcaaaggggcataaatttgtgaggt 31
|||||||||||||||||||||||||||||||
Sbjct: 333 atgaatgcaaaggggcataaatttgtgaggt 363
>gnl|LJGI|TC64938 similar to UniRef100_A7QFZ6 Cluster: Chromosome chr9 scaffold_90,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_90, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 758
Score = 54.0 bits (27), Expect = 4e-06
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 1878 acaatggaaaacttgggctacatgtttcatacaagcagcttggcatagatattgtaaaaa 1937
|||||||| |||||||||| | || || || ||||| || |||| | |||||||||||||
Sbjct: 230 acaatggagaacttgggctgcgtgctttatccaagctgcatggcgtcgatattgtaaaaa 289
Query: 1938 gaaaatt 1944
|||||||
Sbjct: 290 gaaaatt 296