Miyakogusa Predicted Gene
- Lj1g3v5034540.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v5034540.1 Non Chatacterized Hit- tr|G7L422|G7L422_MEDTR
Putative uncharacterized protein OS=Medicago
truncatul,73.77,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL; coiled-coil,NULL; DUF3133,Protein of unkn,CUFF.33879.1
(2727 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73158 similar to UniRef100_A7QNA6 Cluster: Chromosome... 666 0.0
gnl|LJGI|FS345552 similar to UniRef100_A7QNA6 Cluster: Chromosom... 141 3e-32
gnl|LJGI|TC81713 similar to UniRef100_A7PZS8 Cluster: Chromosome... 121 2e-26
gnl|LJGI|BP041887 96 1e-18
>gnl|LJGI|TC73158 similar to UniRef100_A7QNA6 Cluster: Chromosome chr2 scaffold_132,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_132, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 743
Score = 666 bits (336), Expect = 0.0
Identities = 342/344 (99%)
Strand = Plus / Plus
Query: 2384 ggtatgatattcgagctggattttggggtgtcatgggtgggccttgtcttggaataattc 2443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 ggtatgatattcgagctggattttggggtgtcatgggtgggccttgtcttggaataattc 124
Query: 2444 caccatttatagaagagttcaatcaccccatgccggacaaatgttctggtgggagtactg 2503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 caccatttatagaagagttcaatcaccccatgccggacaaatgttctggtgggagtactg 184
Query: 2504 gtgtttttgtaaatggtagagagcttcaccaaaaagatttggatttgctatctggaagag 2563
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 185 gtgtttttgtaaatggtagagagcttcacctcaaagatttggatttgctatctggaagag 244
Query: 2564 gactgccctctgatggagatagatcttatatcattgagatttctgggagagtcctggacg 2623
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gactgccctctgatggagatagatcttatatcattgagatttctgggagagtcctggacg 304
Query: 2624 aagacacaggagaagagctggactgcctaggcaaacttgcacctacagtggagaaagtga 2683
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 aagacacaggagaagagctggactgcctaggcaaacttgcacctacagtggagaaagtga 364
Query: 2684 agcatggattcggcatgaaagcgcctagagcagctacttgagaa 2727
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 agcatggattcggcatgaaagcgcctagagcagctacttgagaa 408
>gnl|LJGI|FS345552 similar to UniRef100_A7QNA6 Cluster: Chromosome chr2 scaffold_132,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_132, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 519
Score = 141 bits (71), Expect = 3e-32
Identities = 164/195 (84%)
Strand = Plus / Minus
Query: 2507 tttttgtaaatggtagagagcttcaccaaaaagatttggatttgctatctggaagaggac 2566
||||||| |||||||| || |||| |||||||||| |||||||| ||| | |||||||
Sbjct: 519 tttttgtgaatggtagggaaattcataaaaaagatttagatttgctttctcgtagaggac 460
Query: 2567 tgccctctgatggagatagatcttatatcattgagatttctgggagagtcctggacgaag 2626
| || | || |||||||||||||||||||||| |||| ||||||||||||||| ||||
Sbjct: 459 ttcctaataatagagatagatcttatatcattgaaatttttgggagagtcctggatgaag 400
Query: 2627 acacaggagaagagctggactgcctaggcaaacttgcacctacagtggagaaagtgaagc 2686
||||||| |||||||| ||| |||| || ||||||||||| || |||||||||| |||
Sbjct: 399 acacaggggaagagcttgacagccttggtaaacttgcaccaacggtggagaaagcaaaga 340
Query: 2687 atggattcggcatga 2701
| ||||| |||||||
Sbjct: 339 aaggatttggcatga 325
>gnl|LJGI|TC81713 similar to UniRef100_A7PZS8 Cluster: Chromosome chr15 scaffold_40,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_40, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 1055
Score = 121 bits (61), Expect = 2e-26
Identities = 85/93 (91%)
Strand = Plus / Plus
Query: 25 ttggtgcggtgccccaagtgtgaaaatctccttcctgagctcgctgattactctgtttat 84
||||||||||||||||| ||| |||| |||||||||||||| |||||||||||||||||
Sbjct: 81 ttggtgcggtgccccaattgtcaaaacctccttcctgagcttgctgattactctgtttac 140
Query: 85 caatgtggtggttgcggtgctgttcttcgagcg 117
||||||||||||| |||||||||||| |||||
Sbjct: 141 aaatgtggtggttgtggtgctgttcttagagcg 173
Score = 101 bits (51), Expect = 2e-20
Identities = 231/291 (79%)
Strand = Plus / Plus
Query: 523 ttttggagaaagcaacgagctgatatggaaagtgtgagattttccaccatgaatttgcat 582
||||||||||||| | ||||||||||||| ||||||||||||||| |||| | | |
Sbjct: 535 ttttggagaaagccatcagctgatatggaaggtgtgagattttccaatttgaactatcct 594
Query: 583 gacgagggaccttcaaatggctattccggttgttctagcaactatatggatccgtggtgg 642
|| || ||| ||||||||||||||||| ||| |||| ||| ||| ||| | ||| ||
Sbjct: 595 gatgaaggaacttcaaatggctattccagttcttcttacaagtatggggaacaatggagg 654
Query: 643 aacaataaagaaacaaatggtgcgaacaaggttcagcatcttgagcaagatcgagctgag 702
| ||||||| | |||| | || |||||||||||| |||||||||||| |||||||
Sbjct: 655 gattataaagacatggatggagtgagcaaggttcagcaccttgagcaagatagagctgat 714
Query: 703 cttctaaggaaactggatgagttaaaggaccagctcggtaagtcttctgaagtggtgaaa 762
||||||||||| ||||| |||||| || || |||||||||||| |||| ||
Sbjct: 715 cttctaaggaagctggaagagttatccatgcatctgaacaagtcttctgaaatggttaat 774
Query: 763 aacccaaaagaaaaggttcttcctgatgaaagggtggttcctccagatcct 813
|| || ||||||||||||||||| |||| || |||||||||||||| ||||
Sbjct: 775 aaacctaaagaaaaggttcttccggatggaaaggtggttcctccaggtcct 825
>gnl|LJGI|BP041887
Length = 332
Score = 95.6 bits (48), Expect = 1e-18
Identities = 81/92 (88%)
Strand = Plus / Plus
Query: 1117 gattcatacgaaccatatgcacataatgcgatgcctcacccgccttcttgctcttgtttc 1176
|||||||| | ||||||||||||| ||| ||||||||||||| |||||||||||||||
Sbjct: 134 gattcatatggaccatatgcacatcgtgctatgcctcacccgcattcttgctcttgtttt 193
Query: 1177 cattgctatgacaacaaacgaaggggtacagt 1208
||||||||||| |||||| |||| ||| ||||
Sbjct: 194 cattgctatgaaaacaaaagaagaggttcagt 225