Miyakogusa Predicted Gene
- Lj1g3v5032340.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v5032340.1 CUFF.33872.1
(870 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59239 similar to UniRef100_A7PZR8 Cluster: Chromosome... 1017 0.0
gnl|LJGI|TC65757 similar to UniRef100_A7PZR8 Cluster: Chromosome... 535 e-151
gnl|LJGI|TC80907 similar to UniRef100_A7QTT5 Cluster: Chromosome... 94 2e-18
>gnl|LJGI|TC59239 similar to UniRef100_A7PZR8 Cluster: Chromosome chr15 scaffold_40,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_40, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 850
Score = 1017 bits (513), Expect = 0.0
Identities = 516/517 (99%)
Strand = Plus / Plus
Query: 1 atggtgccaccagatatcagatgtcatgctactacatctacatcaccttctgctcaccgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 atggtgccaccagatatcagatgtcatgctactacatctacatcaccttctgctcaccgc 393
Query: 61 tataaagggactctagatgtcatgtacaaagttattcgtcaggaaggatttacaagattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tataaagggactctagatgtcatgtacaaagttattcgtcaggaaggatttacaagattg 453
Query: 121 tggagaggcacaaatgcaagtttgacattagctattccaaccgtcggaatctatatgcct 180
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 tggagagacacaaatgcaagtttgacattagctattccaaccgtcggaatctatatgcct 513
Query: 181 tgttatgatatcttccgcaactccatggaggagtttacaactcagaatgctccgagtttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tgttatgatatcttccgcaactccatggaggagtttacaactcagaatgctccgagtttg 573
Query: 241 acaccttacgttccattagttgcaggatcacttgcacgctcgttggcttgcatttcttgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 acaccttacgttccattagttgcaggatcacttgcacgctcgttggcttgcatttcttgt 633
Query: 301 tatcctgtagaacttgcaaagactcgcatgcaggcatttagagtagcccaaagtgacaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 tatcctgtagaacttgcaaagactcgcatgcaggcatttagagtagcccaaagtgacaag 693
Query: 361 gctccaggggtgtggaagacattgcttggagtcatcaaaccagccaagggcacaagtatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 gctccaggggtgtggaagacattgcttggagtcatcaaaccagccaagggcacaagtatt 753
Query: 421 cttcaaagcttacataggtacagattctggtggactggccttggagcacaactttctcgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 cttcaaagcttacataggtacagattctggtggactggccttggagcacaactttctcgg 813
Query: 481 gatgttccatactctgcaatttgctggtcaacccttg 517
|||||||||||||||||||||||||||||||||||||
Sbjct: 814 gatgttccatactctgcaatttgctggtcaacccttg 850
>gnl|LJGI|TC65757 similar to UniRef100_A7PZR8 Cluster: Chromosome chr15 scaffold_40,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_40, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 729
Score = 535 bits (270), Expect = e-151
Identities = 273/274 (99%)
Strand = Plus / Plus
Query: 597 tgggtttgttgcaggaattttagcatctgctgccacatgtccacttgatgtggcaaaaac 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgggtttgttgcaggaattttagcatctgctgccacatgtccacttgatgtggcaaaaac 60
Query: 657 tcgacggcagatagagaaggatcctcaacgggcattaaagatgacaacaagaacaacatt 716
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcgacggcagatagagaaggatcctcaacgggcattaaagatgacaacaagaacaacatt 120
Query: 717 gcttgagatttggagggatggcggattgagggggctatttacaggtgttggtccccgtgt 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gcttgagatttggagggatggcggattgagggggctatttacaggtgttggtccccgtgt 180
Query: 777 aggtcgtgctggtccatccgttgggatagttgtctccttttacgaagttgtcaagtatgc 836
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 181 aggtcgtgctggtccatccgttgggatagttgtctccttttacgaatttgtcaagtatgc 240
Query: 837 cttacgtgatacacatccaaattcagcataggag 870
||||||||||||||||||||||||||||||||||
Sbjct: 241 cttacgtgatacacatccaaattcagcataggag 274
>gnl|LJGI|TC80907 similar to UniRef100_A7QTT5 Cluster: Chromosome undetermined
scaffold_171, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_171, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(73%)
Length = 1294
Score = 93.7 bits (47), Expect = 2e-18
Identities = 80/91 (87%)
Strand = Plus / Plus
Query: 583 gcaaatttttctgctgggtttgttgcaggaattttagcatctgctgccacatgtccactt 642
||||||||||| ||||| ||||||||||||| | ||||| ||| || |||||||||||
Sbjct: 1203 gcaaatttttcagctggttttgttgcaggaactctagcagctggagctacatgtccacta 1262
Query: 643 gatgtggcaaaaactcgacggcagatagaga 673
||||| |||||||||||| ||||||||||||
Sbjct: 1263 gatgttgcaaaaactcgaaggcagatagaga 1293
Score = 52.0 bits (26), Expect = 6e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 100 caggaaggatttacaagattgtggagaggcacaaatgc 137
|||||||||||||| || || |||||||||||||||||
Sbjct: 720 caggaaggatttactaggttatggagaggcacaaatgc 757
Score = 52.0 bits (26), Expect = 6e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 274 gcacgctcgttggcttgcatttcttgttatcctgtagaacttgcaaagactcgcatgcag 333
||||||||||||||||| ||||||||||| |||||||||| | ||||| ||||||
Sbjct: 894 gcacgctcgttggcttgtgcaacttgttatcctatagaacttgcgagaactcgaatgcag 953
Query: 334 gcattt 339
||||||
Sbjct: 954 gcattt 959