Miyakogusa Predicted Gene

Lj1g3v5021270.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v5021270.1 tr|G7JTK1|G7JTK1_MEDTR F-box/LRR-repeat protein
OS=Medicago truncatula GN=MTR_4g039440 PE=4
SV=1,35.53,0.74,seg,NULL,CUFF.33868.1
         (285 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS330951 similar to UniRef100_A7QK65 Cluster: Chromosom...    54   5e-07

>gnl|LJGI|FS330951 similar to UniRef100_A7QK65 Cluster: Chromosome chr19
          scaffold_111, whole genome shotgun sequence; n=1; Vitis
          vinifera|Rep: Chromosome chr19 scaffold_111, whole
          genome shotgun sequence - Vitis vinifera (Grape),
          partial (18%)
          Length = 812

 Score = 54.0 bits (27), Expect = 5e-07
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                      
Query: 6  tgataggattagcgagttgtcagacgaaattctccttctcattctctcgtttcttccaac 65
          ||||||||||||| ||||| |||| ||| |||||  || ||||||||| |||||||| ||
Sbjct: 5  tgataggattagcaagttgccagatgaagttctctgtcacattctctcatttcttcccac 64

             
Query: 66 tga 68
          |||
Sbjct: 65 tga 67