Miyakogusa Predicted Gene
- Lj1g3v5021030.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v5021030.1 Non Chatacterized Hit- tr|D7LXT8|D7LXT8_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,36.65,7e-18,seg,NULL,CUFF.33847.1
(498 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66601 homologue to UniRef100_A7PZ62 Cluster: Chromoso... 535 e-152
gnl|LJGI|TC71774 weakly similar to UniRef100_A7PZ62 Cluster: Chr... 513 e-145
gnl|LJGI|GO010059 homologue to UniRef100_A7PZ62 Cluster: Chromos... 412 e-115
gnl|LJGI|TC75204 homologue to UniRef100_A7PZ62 Cluster: Chromoso... 383 e-106
gnl|LJGI|AV773224 similar to UniRef100_Q1D888 Cluster: General s... 216 1e-55
>gnl|LJGI|TC66601 homologue to UniRef100_A7PZ62 Cluster: Chromosome chr4 scaffold_39,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_39, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 958
Score = 535 bits (270), Expect = e-152
Identities = 270/270 (100%)
Strand = Plus / Plus
Query: 1 atggatgactattgcaagagaagtggacagataccagcgtttgggaactgggattattca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 atggatgactattgcaagagaagtggacagataccagcgtttgggaactgggattattca 748
Query: 61 aatgagatgccaatcactcagtactttgagagtgctagacaagctggtttggttaatcgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 aatgagatgccaatcactcagtactttgagagtgctagacaagctggtttggttaatcgt 808
Query: 121 tacagttcctcttctggtgaaagtgatccttgcaacaacgtgcgtgtggatcacgacctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 tacagttcctcttctggtgaaagtgatccttgcaacaacgtgcgtgtggatcacgacctt 868
Query: 181 tactctgttgatttcaagaagaaacctcttaggaacatgccaccatccactctcagaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 869 tactctgttgatttcaagaagaaacctcttaggaacatgccaccatccactctcagaaag 928
Query: 241 gggatgaggaacagagaaaggaggtacccg 270
||||||||||||||||||||||||||||||
Sbjct: 929 gggatgaggaacagagaaaggaggtacccg 958
>gnl|LJGI|TC71774 weakly similar to UniRef100_A7PZ62 Cluster: Chromosome chr4
scaffold_39, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr4 scaffold_39, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (23%)
Length = 733
Score = 513 bits (259), Expect = e-145
Identities = 259/259 (100%)
Strand = Plus / Plus
Query: 240 ggggatgaggaacagagaaaggaggtacccggtgaaggaaggtatgaacatgaggaagca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggggatgaggaacagagaaaggaggtacccggtgaaggaaggtatgaacatgaggaagca 60
Query: 300 acaagggaaagtgtgggacgtgactgagcatcccaggaagcaccacgacggcgttccgcc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 acaagggaaagtgtgggacgtgactgagcatcccaggaagcaccacgacggcgttccgcc 120
Query: 360 gccggcaccgccaagagctccgaagcctgttgatgaagatctctataagatccctcctga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gccggcaccgccaagagctccgaagcctgttgatgaagatctctataagatccctcctga 180
Query: 420 gctacttcgcagaaccaagaggaagaaaatgctgggtttcatttccaagtgtctggtacc 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gctacttcgcagaaccaagaggaagaaaatgctgggtttcatttccaagtgtctggtacc 240
Query: 480 tgctgcttgcgtttcatga 498
|||||||||||||||||||
Sbjct: 241 tgctgcttgcgtttcatga 259
>gnl|LJGI|GO010059 homologue to UniRef100_A7PZ62 Cluster: Chromosome chr4 scaffold_39,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_39, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 707
Score = 412 bits (208), Expect = e-115
Identities = 229/232 (98%), Gaps = 3/232 (1%)
Strand = Plus / Plus
Query: 7 gactattgcaagagaagtggacagataccagcgtttgggaactgggattattcaaatgag 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gactattgcaagagaagtggacagataccagcgtttgggaactgggattattcaaatgag 534
Query: 67 atgccaatcactcagtactttgagagtgctagacaagctggtttggttaatcgttacagt 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 atgccaatcactcagtactttgagagtgctagacaagctggtttggttaatcgttacagt 594
Query: 127 tcctcttctggtgaaagtgatccttgcaacaacgtgcgtgtggatcacgacctttactct 186
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 595 tcctcttctggtgaaagtgatccttgc-acaacgtgcgtgtggatcacgacctttactct 653
Query: 187 gttgatttcaagaagaaacctcttaggaacatgccaccatccactctcagaa 238
||||||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 654 gttgatttcaagaagaaacctcttagg-acatgccaccat-cactctcagaa 703
>gnl|LJGI|TC75204 homologue to UniRef100_A7PZ62 Cluster: Chromosome chr4 scaffold_39,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_39, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (21%)
Length = 971
Score = 383 bits (193), Expect = e-106
Identities = 193/193 (100%)
Strand = Plus / Plus
Query: 1 atggatgactattgcaagagaagtggacagataccagcgtttgggaactgggattattca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 atggatgactattgcaagagaagtggacagataccagcgtttgggaactgggattattca 810
Query: 61 aatgagatgccaatcactcagtactttgagagtgctagacaagctggtttggttaatcgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 aatgagatgccaatcactcagtactttgagagtgctagacaagctggtttggttaatcgt 870
Query: 121 tacagttcctcttctggtgaaagtgatccttgcaacaacgtgcgtgtggatcacgacctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 tacagttcctcttctggtgaaagtgatccttgcaacaacgtgcgtgtggatcacgacctt 930
Query: 181 tactctgttgatt 193
|||||||||||||
Sbjct: 931 tactctgttgatt 943
>gnl|LJGI|AV773224 similar to UniRef100_Q1D888 Cluster: General secretory system II
protein E N-terminal domain protein; n=1; Myxococcus
xanthus, partial (0%)
Length = 547
Score = 216 bits (109), Expect = 1e-55
Identities = 192/205 (93%), Gaps = 11/205 (5%)
Strand = Plus / Minus
Query: 302 aagggaaagtgtgggacgtgactgagcatcccaggaagcaccacgacggcgttccgccgc 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 aagggaaagtgtgggacgtgactgagcatcccaggaagcaccacgacggcgttccgccgc 488
Query: 362 cggcaccgccaagagctccgaagcc-tgttgatgaagatc-tctataagatccct-cctg 418
||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||
Sbjct: 487 cggcaccgccaagagctccgaagccgtgttgatgaagatcgtctataagatccctgcctg 428
Query: 419 agctactt-cgcagaacca-aga-ggaagaaaatg-ctgggtttca-tttccaagtgt-c 472
|||||||| ||||| ||| ||| ||||||||||| |||||||||| ||||||||||| |
Sbjct: 427 agctactttcgcagtaccccagacggaagaaaatgactgggtttcagtttccaagtgtcc 368
Query: 473 tggta-cctgctg-cttgcgtttca 495
||||| ||||||| |||||||||||
Sbjct: 367 tggtatcctgctgccttgcgtttca 343