Miyakogusa Predicted Gene
- Lj1g3v5020900.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v5020900.1 tr|B7ZGK3|B7ZGK3_LOTJA 121F-specific p53
inducible RNA OS=Lotus japonicus GN=pir PE=2 SV=1,99.68,0,SUBFAMILY
NOT NAMED,NULL; P53 INDUCIBLE PROTEIN-RELATED,Cytoplasmic
FMR1-interacting; FragX_IP,Cytop,CUFF.33859.1
(4159 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC73885 similar to UniRef100_A7PZ49 Cluster: Chromosome... 1074 0.0
gnl|LJGI|DC592977 homologue to UniRef100_Q5S2C3 Cluster: Protein... 634 e-180
>gnl|LJGI|TC73885 similar to UniRef100_A7PZ49 Cluster: Chromosome chr4 scaffold_39,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_39, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 558
Score = 1074 bits (542), Expect = 0.0
Identities = 552/554 (99%), Gaps = 1/554 (0%)
Strand = Plus / Plus
Query: 3600 cactataatttatttgcttgggcaacagctgcattttgagctctttgacttttcatatca 3659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cactataatttatttgcttgggcaacagctgcattttgagctctttgacttttcatatca 60
Query: 3660 gattctcaatattgcagaagtggaggctgcatctgttgtgcaaacacacaagaacacgca 3719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gattctcaatattgcagaagtggaggctgcatctgttgtgcaaacacacaagaacacgca 120
Query: 3720 cctccctgttcagggatgggaaaccttgttggaagcaatgaaaaaagctaggagattaaa 3779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cctccctgttcagggatgggaaaccttgttggaagcaatgaaaaaagctaggagattaaa 180
Query: 3780 taatcatgtattctctatgcttagagcacgctgcccccttgaagaaaaaactgcctgtgc 3839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taatcatgtattctctatgcttagagcacgctgcccccttgaagaaaaaactgcctgtgc 240
Query: 3840 tattaagcaaagtggtgctccaatacatcgtataaaatttgataacacagtttcagcatt 3899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tattaagcaaagtggtgctccaatacatcgtataaaatttgataacacagtttcagcatt 300
Query: 3900 tgaaacactgccacagaaaggtgcttaaacaagttgtctgttcggtgtatatatatcgtg 3959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgaaacactgccacagaaaggtgcttaaacaagttgtctgttcggtgtatatatatcgtg 360
Query: 3960 taacattgcagtgttgtatgtaatagatagcaagtattatgtaaatgtttcatcagctgg 4019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 taacattgcagtgttgtatgtaatagatagcaagtattatgtaaatgtttcatcagctgg 420
Query: 4020 aatttttgttgagggagtaacaatttagcatttgatcttgacgtgggtgtttgattgaac 4079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aatttttgttgagggagtaacaatttagcatttgatcttgacgtgggtgtttgattgaac 480
Query: 4080 aaaataagcttaatttacacttttctacatataacacttgatgttgatgtaatagtgttc 4139
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 481 caaataagcttaatttacacttttctacatataac-cttgatgttgatgtaatagtgttc 539
Query: 4140 tatgtaacgtggtc 4153
||||||||||||||
Sbjct: 540 tatgtaacgtggtc 553
>gnl|LJGI|DC592977 homologue to UniRef100_Q5S2C3 Cluster: Protein PIR; n=1; Arabidopsis
thaliana|Rep: Protein PIR - Arabidopsis thaliana
(Mouse-ear cress), partial (8%)
Length = 324
Score = 634 bits (320), Expect = e-180
Identities = 323/324 (99%)
Strand = Plus / Plus
Query: 1361 ggaaattttctcgaccatgcaaggatgcatccccatcattctctgactatgaaaaggtag 1420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggaaattttctcgaccatgcaaggatgcatccccatcattctctgactatgaaaaggtag 60
Query: 1421 taagatataactacactgcagaggaaaggaaagcactggttgaacttgtgagcaacataa 1480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taagatataactacactgcagaggaaaggaaagcactggttgaacttgtgagcaacataa 120
Query: 1481 agagtgtcggatctatggtgcagcggtgtgatacactcgttgctgatgctttatgggaaa 1540
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 121 agagtgtcggatctatggtgcagccgtgtgatacactcgttgctgatgctttatgggaaa 180
Query: 1541 caatacattctgaggtccaagattttgttcaaaacacattagcttctatgttgcggacta 1600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 caatacattctgaggtccaagattttgttcaaaacacattagcttctatgttgcggacta 240
Query: 1601 cctttagaaagaagaaggacctttctaggattctttctgatatgaggaccctttcagctg 1660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cctttagaaagaagaaggacctttctaggattctttctgatatgaggaccctttcagctg 300
Query: 1661 attggatggctaatactaacaagt 1684
||||||||||||||||||||||||
Sbjct: 301 attggatggctaatactaacaagt 324