Miyakogusa Predicted Gene
- Lj1g3v5020820.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v5020820.1 tr|C1FHQ2|C1FHQ2_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17) GN=MICPUN_62160
,31.11,5e-18,FAMILY NOT NAMED,NULL; Whirly,Plant transcription factor;
no description,ssDNA-binding transcription,CUFF.33827.1
(711 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74319 similar to UniRef100_A7Q7T2 Cluster: Chromosome... 1378 0.0
gnl|LJGI|DN652311 133 2e-30
>gnl|LJGI|TC74319 similar to UniRef100_A7Q7T2 Cluster: Chromosome chr18 scaffold_61,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_61, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (61%)
Length = 1132
Score = 1378 bits (695), Expect = 0.0
Identities = 707/711 (99%)
Strand = Plus / Plus
Query: 1 atgttgaagcttttgcgcgttcttccttccacttccaggaattgggtattggaaatggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgttgaagcttttgcgcgttcttccttccacttccaggaattgggtattggaaatggaa 120
Query: 61 gtgttatcatcatctaggaaccctcaagttagagacttttctactgctgctagagaaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtgttatcatcatctaggaaccctcaagttagagacttttctactgctgctagagaaacc 180
Query: 121 tatgttgctaaaggatacactacggatcgcgtatttgctccttattatgtttacaagggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tatgttgctaaaggatacactacggatcgcgtatttgctccttattatgtttacaagggc 240
Query: 181 aaagctgctatgtcattgtctcctgttcttccaacttttactaagttggattctggggct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaagctgctatgtcattgtctcctgttcttccaacttttactaagttggattctggggct 300
Query: 241 cttgtggttgagcgtcgcggttccataatgatggttttcacgcctgctatcggggagcgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cttgtggttgagcgtcgcggttccataatgatggttttcacgcctgctatcggggagcgc 360
Query: 301 aaatatgactgggagaagagacagaaatttgctctctcagcaactgaagttggttctttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 aaatatgactgggagaagagacagaaatttgctctctcagcaactgaagttggttctttg 420
Query: 361 atagccatgggtccccaagattcttgtgaattcttccatgacccctcaatgtcatcaagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atagccatgggtccccaagattcttgtgaattcttccatgacccctcaatgtcatcaagt 480
Query: 421 aatgctggtcaagtaaggaagagtttatcaattaagcctcatgcaaacagtagcggttac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aatgctggtcaagtaaggaagagtttatcaattaagcctcatgcaaacagtagcggttac 540
Query: 481 tttgtgtctttgactgttgtcaataacctgttaaatgccaaagaaaacttcaacgtgcct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tttgtgtctttgactgttgtcaataacctgttaaatgccaaagaaaacttcaacgtgcct 600
Query: 541 gtcactactgctgagtttgctgtgatgaagacggcttgcagttttgcattgccacacatc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtcactactgctgagtttgctgtgatgaagacggcttgcagttttgcattgccacacatc 660
Query: 601 atgggctgggaccgtttaactaatcagcagtccagtctgcccggagggacagttggcctt 660
||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||
Sbjct: 661 atgggctgggaccgtttaactaatcagcagtcccgtctgcccggagggaccgttggcctt 720
Query: 661 cagtcgaaggtggacaaaccagttttcgacttggaatgggataagtgaatt 711
||||||||||||||| |||| ||||||||||||||||||||||||||||||
Sbjct: 721 cagtcgaaggtggaccaacccgttttcgacttggaatgggataagtgaatt 771
>gnl|LJGI|DN652311
Length = 199
Score = 133 bits (67), Expect = 2e-30
Identities = 67/67 (100%)
Strand = Plus / Minus
Query: 326 aatttgctctctcagcaactgaagttggttctttgatagccatgggtccccaagattctt 385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 aatttgctctctcagcaactgaagttggttctttgatagccatgggtccccaagattctt 8
Query: 386 gtgaatt 392
|||||||
Sbjct: 7 gtgaatt 1