Miyakogusa Predicted Gene
- Lj1g3v5020810.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v5020810.1 Non Chatacterized Hit- tr|D8R8L6|D8R8L6_SELML
Putative uncharacterized protein OS=Selaginella
moelle,56.47,3e-19,CMYCBINDINGP,NULL; coiled-coil,NULL; SUBFAMILY NOT
NAMED,NULL; ASSOCIATE OF C-MYC (AMY-1),Associate ,CUFF.33830.1
(351 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67244 similar to UniRef100_A7QMR3 Cluster: Chromosome... 674 0.0
gnl|LJGI|GO032158 homologue to UniRef100_A7QMR3 Cluster: Chromos... 452 e-127
>gnl|LJGI|TC67244 similar to UniRef100_A7QMR3 Cluster: Chromosome undetermined
scaffold_127, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_127,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (86%)
Length = 663
Score = 674 bits (340), Expect = 0.0
Identities = 350/352 (99%), Gaps = 1/352 (0%)
Strand = Plus / Plus
Query: 1 atgatgcgattcaaagaggaaaaagaagcaaagaaggaagcttttagaaaatatctggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 atgatgcgattcaaagaggaaaaagaagcaaagaaggaagcttttagaaaatatctggaa 172
Query: 61 tcaagtggagctgttgatgctctcaccaaagttcttgttgctttatatgagcaaaatgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 tcaagtggagctgttgatgctctcaccaaagttcttgttgctttatatgagcaaaatgac 232
Query: 121 aaaccttcttctgcacttgagttcattcaacagaaattgagctgtccttccatctcagag 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 aaacctccttctgcacttgagttcattcaacagaaattgagctgtccttccatctcagag 292
Query: 181 tatgaaaaattgcaagctgaattctctgatctgcaaattagatataatgagcttcttgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 tatgaaaaattgcaagctgaattctctgatctgcaaattagatataatgagcttcttgct 352
Query: 241 gcacatcacaccacttgcaaagagttggaagaaatgaaaagctcgcatgcc-ttggcaat 299
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 353 gcacatcacaccacttgcaaagagttggaagaaatgaaaagctcgcatgcctttggcaat 412
Query: 300 ggcatcttccaaggaaacaactgatattgaaccccctaaagatgtgctctaa 351
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 ggcatcttccaaggaaacaactgatattgaaccccctaaagatgtgctctaa 464
>gnl|LJGI|GO032158 homologue to UniRef100_A7QMR3 Cluster: Chromosome undetermined
scaffold_127, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_127,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (46%)
Length = 417
Score = 452 bits (228), Expect = e-127
Identities = 241/245 (98%), Gaps = 4/245 (1%)
Strand = Plus / Plus
Query: 1 atgatgcgattcaaagaggaaaaagaagcaaagaaggaagcttttagaaaatatctggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 atgatgcgattcaaagaggaaaaagaagcaaagaaggaagcttttagaaaatatctggaa 232
Query: 61 tcaagtggagctgttgatgctctcaccaaagttcttgttgctttatatgagcaaaatgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 233 tcaagtggagctgttgatgctctcaccaaagttcttgttgctttatatgagcaaaatgac 292
Query: 121 aaaccttcttctgcacttga----gttcattcaacagaaattgagctgtccttccatctc 176
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 293 aaaccttcttctgcacttgagcaggttcattcaacagaaattgagctgtccttccatctc 352
Query: 177 agagtatgaaaaattgcaagctgaattctctgatctgcaaattagatataatgagcttct 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 agagtatgaaaaattgcaagctgaattctctgatctgcaaattagatataatgagcttct 412
Query: 237 tgctg 241
|||||
Sbjct: 413 tgctg 417