Miyakogusa Predicted Gene
- Lj1g3v5010660.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v5010660.1 Non Chatacterized Hit- tr|B9F3T1|B9F3T1_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,43.75,0.000000000000005,PHOSPHATASE 2A REGULATORY
SUBUNIT-RELATED,NULL; seg,NULL,CUFF.33812.1
(582 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC598334 similar to UniRef100_A7QMW5 Cluster: Chromosom... 613 e-175
gnl|LJGI|TC73269 similar to UniRef100_A7QMW5 Cluster: Chromosome... 504 e-142
gnl|LJGI|TC58618 similar to UniRef100_A7QMW5 Cluster: Chromosome... 357 5e-98
>gnl|LJGI|DC598334 similar to UniRef100_A7QMW5 Cluster: Chromosome chr14 scaffold_128,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_128, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 507
Score = 613 bits (309), Expect = e-175
Identities = 309/309 (100%)
Strand = Plus / Plus
Query: 1 atgacgatggaggtcgttaccgatgcggcgtcgttggaggtcgaattgttgcagctaccg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 atgacgatggaggtcgttaccgatgcggcgtcgttggaggtcgaattgttgcagctaccg 258
Query: 61 gaggtttcctccttggctctcaagtctaacctcgccttcgttgagacgctcttcgaccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 gaggtttcctccttggctctcaagtctaacctcgccttcgttgagacgctcttcgaccag 318
Query: 121 tggctctcgcttcctgaaagcaatcgattggtaacgtcgttgctgaatgaagcgaagtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tggctctcgcttcctgaaagcaatcgattggtaacgtcgttgctgaatgaagcgaagtca 378
Query: 181 ggtgctccgttgaatgtcccggggaattgctctagtccaaatgctacgagcaattctttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ggtgctccgttgaatgtcccggggaattgctctagtccaaatgctacgagcaattctttg 438
Query: 241 ccttccatgtttcctgcgggcactgcgccacctctttcaccgaggagttcgtctggttcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 ccttccatgtttcctgcgggcactgcgccacctctttcaccgaggagttcgtctggttcc 498
Query: 301 cctcgcata 309
|||||||||
Sbjct: 499 cctcgcata 507
>gnl|LJGI|TC73269 similar to UniRef100_A7QMW5 Cluster: Chromosome chr14 scaffold_128,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_128, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 849
Score = 504 bits (254), Expect = e-142
Identities = 254/254 (100%)
Strand = Plus / Plus
Query: 127 tcgcttcctgaaagcaatcgattggtaacgtcgttgctgaatgaagcgaagtcaggtgct 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tcgcttcctgaaagcaatcgattggtaacgtcgttgctgaatgaagcgaagtcaggtgct 64
Query: 187 ccgttgaatgtcccggggaattgctctagtccaaatgctacgagcaattctttgccttcc 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 ccgttgaatgtcccggggaattgctctagtccaaatgctacgagcaattctttgccttcc 124
Query: 247 atgtttcctgcgggcactgcgccacctctttcaccgaggagttcgtctggttcccctcgc 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 atgtttcctgcgggcactgcgccacctctttcaccgaggagttcgtctggttcccctcgc 184
Query: 307 atagtgaaacatagagttggtccttctaatttgggttctccgttgaaggttgtgagcgag 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 atagtgaaacatagagttggtccttctaatttgggttctccgttgaaggttgtgagcgag 244
Query: 367 ccggttaaagaagt 380
||||||||||||||
Sbjct: 245 ccggttaaagaagt 258
>gnl|LJGI|TC58618 similar to UniRef100_A7QMW5 Cluster: Chromosome chr14 scaffold_128,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_128, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 771
Score = 357 bits (180), Expect = 5e-98
Identities = 359/418 (85%), Gaps = 3/418 (0%)
Strand = Plus / Plus
Query: 7 atggaggtcgttaccgatgcggcgtcgttggaggtcgaattgttgcagctaccggaggtt 66
||||||||||| || ||||||||||||||||| ||||||||||||||||| |||||| ||
Sbjct: 357 atggaggtcgtcactgatgcggcgtcgttggacgtcgaattgttgcagctgccggagttt 416
Query: 67 tcctccttggctctcaagtctaacctcgccttcgttgagacgctcttcgaccagtggctc 126
|| | |||||||||||||||||| || |||||||||| ||| || || ||||| |
Sbjct: 417 tcagctttggctctcaagtctaacttcaatttcgttgagaagctttttgaggagtggttg 476
Query: 127 tcgcttcctgaaagcaatcgattggtaacgtcgttgctgaatgaagcgaagtcaggtgct 186
||||||||||||||||||||| | ||||| |||||| ||||||| || ||||||||||||
Sbjct: 477 tcgcttcctgaaagcaatcgacttgtaacatcgttgttgaatgacgctaagtcaggtgct 536
Query: 187 ccgttgaatgtcccggggaattgctctagtccaaatgctacgagcaattctttgccttcc 246
|| ||||||||||| |||||||||||||||||||||||| |||||| | |||||||||||
Sbjct: 537 cccttgaatgtcccagggaattgctctagtccaaatgctgcgagcagtcctttgccttcc 596
Query: 247 atgtttcctgcgggcactgcgccacctctttcaccgaggagttcgtctggttcccctcgc 306
|||||||| || |||||||| ||||||||||| || || ||| | |||||||||||||||
Sbjct: 597 atgtttccggctggcactgctccacctctttctccaagaagtacatctggttcccctcgc 656
Query: 307 atagtgaaacatagagttggtccttctaatttgggttctccgttgaaggttgtgagcgag 366
|| |||||||| ||| | |||||| |||||||| ||||| || || ||||| || |||
Sbjct: 657 attgtgaaacaaaga---gctccttcaaatttgggctctcctttaaaagttgtcagtgag 713
Query: 367 ccggttaaagaagttatacctcagttctactttcaaaatgggcgtcctccaccaaatg 424
|| |||||||||| ||||||||||||||||||||| |||| |||| || |||||||
Sbjct: 714 ccaattaaagaagtgatacctcagttctactttcaacatggatgtccacctccaaatg 771