Miyakogusa Predicted Gene

Lj1g3v5000610.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v5000610.1 Non Chatacterized Hit- tr|F1MVW4|F1MVW4_BOVIN
Uncharacterized protein (Fragment) OS=Bos taurus GN=XP,24.07,4e-18,GB
DEF: T27C4.14 PROTEIN,NULL; EXPORTIN 4,7-RELATED,NULL; seg,NULL; ARM
repeat,Armadillo-type fold,CUFF.33817.1
         (1800 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP055040 similar to UniRef100_A7QMV8 Cluster: Chromosom...  1021   0.0  

>gnl|LJGI|BP055040 similar to UniRef100_A7QMV8 Cluster: Chromosome chr14 scaffold_128,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_128, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (14%)
          Length = 525

 Score = 1021 bits (515), Expect = 0.0
 Identities = 524/526 (99%), Gaps = 1/526 (0%)
 Strand = Plus / Minus

                                                                       
Query: 315 tgcgagttctcctgatggctatgtccaagcaaaggtatcttctgtggctgctcagttgat 374
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 525 tgcgagttctcctgatggctatgtccaagcnaaggtatcttctgtggctgctcagttgat 466

                                                                       
Query: 375 gaaaagggcttggcttgagtttgcagcagcagagaaggagacactcttttatcaggtgaa 434
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 gaaaagggcttggcttgagtttgcagcagcagagaaggagacactcttttatcaggtgaa 406

                                                                       
Query: 435 ccaggctattgtgggcattcatggattagatgtgcagtttgctggaatcaaatttcttga 494
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 ccaggctattgtgggcattcatggattagatgtgcagtttgctggaatcaaatttcttga 346

                                                                       
Query: 495 atcgttggtatctgaattttctccatctacttcaagtgctatgggccttccaagggaatt 554
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 atcgttggtatctgaattttctccatctacttcaagtgctatgggccttccaagggaatt 286

                                                                       
Query: 555 tcatgagcagtgtaggacttcatttgaaaaagactacctgaagacattctaccgatggac 614
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tcatgagcagtgtaggacttcatttgaaaaagactacctgaagacattctaccgatggac 226

                                                                       
Query: 615 acaagaagctgcttcaagtgtcacaagtaggattattgaatctgactctgttgtacctga 674
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 acaagaagctgcttcaagtgtcacaagtaggattattgaatctgactctgttgtacctga 166

                                                                       
Query: 675 ggttaaagtttgcactactgcactggatctcatgcttcaaatcctaaattgggattttcg 734
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 ggttaaagtttgcactactgcactggatctcatgcttcaaatcctaaattgggattttcg 106

                                                                       
Query: 735 ttgcaataccagtgacacaaaaataaatgtaaatatcttctcttctggagttaggcaaga 794
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 105 ttgcaataccagtgacacaaaaataaatgtaaatatcttctcttctggagttaggc-aga 47

                                                         
Query: 795 cggggatactcctaaaagatctgaatgtcacctagtgcagcctggt 840
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46  cggggatactcctaaaagatctgaatgtcacctagtgcagcctggt 1