Miyakogusa Predicted Gene

Lj1g3v4998490.1
Show Alignment: 
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4998490.1 Non Chatacterized Hit- tr|I1JRR9|I1JRR9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.15277
PE,83.07,0,SUBFAMILY NOT NAMED,NULL; PEROXISOME ASSEMBLY PROTEIN 12
(PEROXIN-12),Peroxisome assembly protein 12,CUFF.33797.1
         (1137 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69758 similar to UniRef100_A7Q841 Cluster: Chromosome...  2254   0.0  
gnl|LJGI|BP065734 similar to UniRef100_A7Q841 Cluster: Chromosom...   107   2e-22
gnl|LJGI|BW595372 similar to UniRef100_A7Q841 Cluster: Chromosom...   101   9e-21
gnl|LJGI|AV772031 similar to UniRef100_A7Q841 Cluster: Chromosom...    96   6e-19
gnl|LJGI|TC65530 similar to UniRef100_A7Q841 Cluster: Chromosome...    96   6e-19
gnl|LJGI|TC77698                                                       86   6e-16
gnl|LJGI|TC70342 weakly similar to UniRef100_Q6L8U3 Cluster: Aux...    86   6e-16
gnl|LJGI|TC73716                                                       56   5e-07

>gnl|LJGI|TC69758 similar to UniRef100_A7Q841 Cluster: Chromosome undetermined
            scaffold_62, whole genome shotgun sequence; n=1; Vitis
            vinifera|Rep: Chromosome undetermined scaffold_62, whole
            genome shotgun sequence - Vitis vinifera (Grape), partial
            (87%)
          Length = 1384

 Score = 2254 bits (1137), Expect = 0.0
 Identities = 1137/1137 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgttgtttcaggtgggaggccaagggagccgcccaacgttcttcgagatggcggcggcg 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22   atgttgtttcaggtgggaggccaagggagccgcccaacgttcttcgagatggcggcggcg 81

                                                                        
Query: 61   gagcagcttccggccagcctccgcgccgcactcacatactcaatcggcgtgttagccttg 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82   gagcagcttccggccagcctccgcgccgcactcacatactcaatcggcgtgttagccttg 141

                                                                        
Query: 121  cgacgacccttcctccacagattcctagactacgaagacgaatccttcgccttcctcatg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142  cgacgacccttcctccacagattcctagactacgaagacgaatccttcgccttcctcatg 201

                                                                        
Query: 181  ctcctcctcgaatctcacagtttacgaaccaccgatgcttctttctctgaatcgctgtat 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202  ctcctcctcgaatctcacagtttacgaaccaccgatgcttctttctctgaatcgctgtat 261

                                                                        
Query: 241  ggacttcgaagaagaccagccaatgtcactgttgatactagcgataacgctgcagctacc 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262  ggacttcgaagaagaccagccaatgtcactgttgatactagcgataacgctgcagctacc 321

                                                                        
Query: 301  actgccactccttctgggttacacaggcgccagaaagttctttctgttgtttttctggtt 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322  actgccactccttctgggttacacaggcgccagaaagttctttctgttgtttttctggtt 381

                                                                        
Query: 361  gtgttgccatatttgaaatctaagttgcatacaatctacaacagagaaagggaagctagg 420
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382  gtgttgccatatttgaaatctaagttgcatacaatctacaacagagaaagggaagctagg 441

                                                                        
Query: 421  cttcaggctactctttggggagatgataatgaagctggagtaggaggttttgaacaggat 480
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442  cttcaggctactctttggggagatgataatgaagctggagtaggaggttttgaacaggat 501

                                                                        
Query: 481  tcacttgtttccacaccaaccttggatgcccatgcctccattgccgcacgggtccgaagc 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502  tcacttgtttccacaccaaccttggatgcccatgcctccattgccgcacgggtccgaagc 561

                                                                        
Query: 541  agagttcagaaatttgttggattttgctacccatggttgcatgctagcactgagggtatg 600
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562  agagttcagaaatttgttggattttgctacccatggttgcatgctagcactgagggtatg 621

                                                                        
Query: 601  catttcacttacaagatgttatacctgttggatgctactggattctactctctagcactg 660
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622  catttcacttacaagatgttatacctgttggatgctactggattctactctctagcactg 681

                                                                        
Query: 661  catgtgctccgggttcaggtctgccgagctacagggcaagagctgatggatacctcttct 720
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682  catgtgctccgggttcaggtctgccgagctacagggcaagagctgatggatacctcttct 741

                                                                        
Query: 721  agaatttcaaagatgcgtagccgtgaacgtgagagacttcgtggcccgcaatggttgaag 780
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742  agaatttcaaagatgcgtagccgtgaacgtgagagacttcgtggcccgcaatggttgaag 801

                                                                        
Query: 781  acattgcaaggagcattactcagctgttcatacactgtacttgactatgcacaaaccgga 840
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802  acattgcaaggagcattactcagctgttcatacactgtacttgactatgcacaaaccgga 861

                                                                        
Query: 841  ttgattgcagcagtgttcttctttaaaatgatggaatggtggtaccagtctgctgaggag 900
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862  ttgattgcagcagtgttcttctttaaaatgatggaatggtggtaccagtctgctgaggag 921

                                                                        
Query: 901  agaatgtcagctccaacagtatatcctcctccccctccacctcctccaccaaaggtagca 960
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 922  agaatgtcagctccaacagtatatcctcctccccctccacctcctccaccaaaggtagca 981

                                                                        
Query: 961  aaagaaggggtaccgctacccccagacagagcagtttgccccttgtgtttgcagaagcgt 1020
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 982  aaagaaggggtaccgctacccccagacagagcagtttgccccttgtgtttgcagaagcgt 1041

                                                                        
Query: 1021 gtaaatccatctgtaatttcagtttcagggttcgtcttctgctatgcttgtgtattcaag 1080
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1042 gtaaatccatctgtaatttcagtttcagggttcgtcttctgctatgcttgtgtattcaag 1101

                                                                     
Query: 1081 tatatttctcagtataagcgctgcccagtgacgctgatgccttcaacagttgaccag 1137
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1102 tatatttctcagtataagcgctgcccagtgacgctgatgccttcaacagttgaccag 1158


>gnl|LJGI|BP065734 similar to UniRef100_A7Q841 Cluster: Chromosome undetermined
           scaffold_62, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_62, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (7%)
          Length = 406

 Score =  107 bits (54), Expect = 2e-22
 Identities = 78/86 (90%)
 Strand = Plus / Minus

                                                                       
Query: 782 cattgcaaggagcattactcagctgttcatacactgtacttgactatgcacaaaccggat 841
           |||||||||||||| ||||||||||| |||| ||||||||||||||||||||||| ||||
Sbjct: 296 cattgcaaggagcactactcagctgtacatatactgtacttgactatgcacaaactggat 237

                                     
Query: 842 tgattgcagcagtgttcttctttaaa 867
           |||||||| ||   ||||||||||||
Sbjct: 236 tgattgcaacatatttcttctttaaa 211


>gnl|LJGI|BW595372 similar to UniRef100_A7Q841 Cluster: Chromosome undetermined
           scaffold_62, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_62, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (7%)
          Length = 487

 Score =  101 bits (51), Expect = 9e-21
 Identities = 66/71 (92%)
 Strand = Plus / Plus

                                                                       
Query: 782 cattgcaaggagcattactcagctgttcatacactgtacttgactatgcacaaaccggat 841
           |||||||||||||| |||||||| || ||||||||||||||||| |||||||||| ||||
Sbjct: 162 cattgcaaggagcactactcagcagtacatacactgtacttgacaatgcacaaactggat 221

                      
Query: 842 tgattgcagca 852
           |||||||||||
Sbjct: 222 tgattgcagca 232


>gnl|LJGI|AV772031 similar to UniRef100_A7Q841 Cluster: Chromosome undetermined
           scaffold_62, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_62, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (8%)
          Length = 599

 Score = 95.6 bits (48), Expect = 6e-19
 Identities = 63/68 (92%)
 Strand = Plus / Minus

                                                                       
Query: 782 cattgcaaggagcattactcagctgttcatacactgtacttgactatgcacaaaccggat 841
           |||||||||||||| |||||||| || ||||||||||||||||| |||||||||| ||||
Sbjct: 492 cattgcaaggagcactactcagcagtacatacactgtacttgacaatgcacaaactggat 433

                   
Query: 842 tgattgca 849
           ||||||||
Sbjct: 432 tgattgca 425


>gnl|LJGI|TC65530 similar to UniRef100_A7Q841 Cluster: Chromosome undetermined
           scaffold_62, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_62, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (7%)
          Length = 685

 Score = 95.6 bits (48), Expect = 6e-19
 Identities = 63/68 (92%)
 Strand = Plus / Plus

                                                                       
Query: 782 cattgcaaggagcattactcagctgttcatacactgtacttgactatgcacaaaccggat 841
           |||||||||||||| |||||||| || ||||||||||||||||| |||||||||| ||||
Sbjct: 286 cattgcaaggagcactactcagcagtacatacactgtacttgacaatgcacaaactggat 345

                   
Query: 842 tgattgca 849
           ||||||||
Sbjct: 346 tgattgca 353


>gnl|LJGI|TC77698 
          Length = 603

 Score = 85.7 bits (43), Expect = 6e-16
 Identities = 58/63 (92%)
 Strand = Plus / Plus

                                                                       
Query: 868 atgatggaatggtggtaccagtctgctgaggagagaatgtcagctccaacagtatatcct 927
           ||||||||||| ||||||||||||| |||||||||||| |||||| ||||||||| ||||
Sbjct: 12  atgatggaatgttggtaccagtctgttgaggagagaatatcagcttcaacagtatgtcct 71

              
Query: 928 cct 930
           |||
Sbjct: 72  cct 74


>gnl|LJGI|TC70342 weakly similar to UniRef100_Q6L8U3 Cluster: Auxin response factor
           1; n=1; Cucumis sativus|Rep: Auxin response factor 1 -
           Cucumis sativus (Cucumber), partial (3%)
          Length = 1324

 Score = 85.7 bits (43), Expect = 6e-16
 Identities = 58/63 (92%)
 Strand = Plus / Plus

                                                                       
Query: 868 atgatggaatggtggtaccagtctgctgaggagagaatgtcagctccaacagtatatcct 927
           ||||||||||| ||||||||||||| |||||||||||| |||||| ||||||||| ||||
Sbjct: 762 atgatggaatgttggtaccagtctgttgaggagagaatatcagcttcaacagtatgtcct 821

              
Query: 928 cct 930
           |||
Sbjct: 822 cct 824


>gnl|LJGI|TC73716 
          Length = 559

 Score = 56.0 bits (28), Expect = 5e-07
 Identities = 46/52 (88%)
 Strand = Plus / Plus

                                                               
Query: 868 atgatggaatggtggtaccagtctgctgaggagagaatgtcagctccaacag 919
           |||||||||||  || ||  ||||||||| ||||||||||||||||||||||
Sbjct: 178 atgatggaatgtgggcacaggtctgctgaagagagaatgtcagctccaacag 229