Miyakogusa Predicted Gene
- Lj1g3v4998490.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4998490.1 Non Chatacterized Hit- tr|I1JRR9|I1JRR9_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.15277
PE,83.07,0,SUBFAMILY NOT NAMED,NULL; PEROXISOME ASSEMBLY PROTEIN 12
(PEROXIN-12),Peroxisome assembly protein 12,CUFF.33797.1
(1137 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69758 similar to UniRef100_A7Q841 Cluster: Chromosome... 2254 0.0
gnl|LJGI|BP065734 similar to UniRef100_A7Q841 Cluster: Chromosom... 107 2e-22
gnl|LJGI|BW595372 similar to UniRef100_A7Q841 Cluster: Chromosom... 101 9e-21
gnl|LJGI|AV772031 similar to UniRef100_A7Q841 Cluster: Chromosom... 96 6e-19
gnl|LJGI|TC65530 similar to UniRef100_A7Q841 Cluster: Chromosome... 96 6e-19
gnl|LJGI|TC77698 86 6e-16
gnl|LJGI|TC70342 weakly similar to UniRef100_Q6L8U3 Cluster: Aux... 86 6e-16
gnl|LJGI|TC73716 56 5e-07
>gnl|LJGI|TC69758 similar to UniRef100_A7Q841 Cluster: Chromosome undetermined
scaffold_62, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_62, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(87%)
Length = 1384
Score = 2254 bits (1137), Expect = 0.0
Identities = 1137/1137 (100%)
Strand = Plus / Plus
Query: 1 atgttgtttcaggtgggaggccaagggagccgcccaacgttcttcgagatggcggcggcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22 atgttgtttcaggtgggaggccaagggagccgcccaacgttcttcgagatggcggcggcg 81
Query: 61 gagcagcttccggccagcctccgcgccgcactcacatactcaatcggcgtgttagccttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 gagcagcttccggccagcctccgcgccgcactcacatactcaatcggcgtgttagccttg 141
Query: 121 cgacgacccttcctccacagattcctagactacgaagacgaatccttcgccttcctcatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 cgacgacccttcctccacagattcctagactacgaagacgaatccttcgccttcctcatg 201
Query: 181 ctcctcctcgaatctcacagtttacgaaccaccgatgcttctttctctgaatcgctgtat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ctcctcctcgaatctcacagtttacgaaccaccgatgcttctttctctgaatcgctgtat 261
Query: 241 ggacttcgaagaagaccagccaatgtcactgttgatactagcgataacgctgcagctacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ggacttcgaagaagaccagccaatgtcactgttgatactagcgataacgctgcagctacc 321
Query: 301 actgccactccttctgggttacacaggcgccagaaagttctttctgttgtttttctggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 actgccactccttctgggttacacaggcgccagaaagttctttctgttgtttttctggtt 381
Query: 361 gtgttgccatatttgaaatctaagttgcatacaatctacaacagagaaagggaagctagg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gtgttgccatatttgaaatctaagttgcatacaatctacaacagagaaagggaagctagg 441
Query: 421 cttcaggctactctttggggagatgataatgaagctggagtaggaggttttgaacaggat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 cttcaggctactctttggggagatgataatgaagctggagtaggaggttttgaacaggat 501
Query: 481 tcacttgtttccacaccaaccttggatgcccatgcctccattgccgcacgggtccgaagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tcacttgtttccacaccaaccttggatgcccatgcctccattgccgcacgggtccgaagc 561
Query: 541 agagttcagaaatttgttggattttgctacccatggttgcatgctagcactgagggtatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 agagttcagaaatttgttggattttgctacccatggttgcatgctagcactgagggtatg 621
Query: 601 catttcacttacaagatgttatacctgttggatgctactggattctactctctagcactg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 catttcacttacaagatgttatacctgttggatgctactggattctactctctagcactg 681
Query: 661 catgtgctccgggttcaggtctgccgagctacagggcaagagctgatggatacctcttct 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 catgtgctccgggttcaggtctgccgagctacagggcaagagctgatggatacctcttct 741
Query: 721 agaatttcaaagatgcgtagccgtgaacgtgagagacttcgtggcccgcaatggttgaag 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 agaatttcaaagatgcgtagccgtgaacgtgagagacttcgtggcccgcaatggttgaag 801
Query: 781 acattgcaaggagcattactcagctgttcatacactgtacttgactatgcacaaaccgga 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 acattgcaaggagcattactcagctgttcatacactgtacttgactatgcacaaaccgga 861
Query: 841 ttgattgcagcagtgttcttctttaaaatgatggaatggtggtaccagtctgctgaggag 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 862 ttgattgcagcagtgttcttctttaaaatgatggaatggtggtaccagtctgctgaggag 921
Query: 901 agaatgtcagctccaacagtatatcctcctccccctccacctcctccaccaaaggtagca 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 922 agaatgtcagctccaacagtatatcctcctccccctccacctcctccaccaaaggtagca 981
Query: 961 aaagaaggggtaccgctacccccagacagagcagtttgccccttgtgtttgcagaagcgt 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 982 aaagaaggggtaccgctacccccagacagagcagtttgccccttgtgtttgcagaagcgt 1041
Query: 1021 gtaaatccatctgtaatttcagtttcagggttcgtcttctgctatgcttgtgtattcaag 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1042 gtaaatccatctgtaatttcagtttcagggttcgtcttctgctatgcttgtgtattcaag 1101
Query: 1081 tatatttctcagtataagcgctgcccagtgacgctgatgccttcaacagttgaccag 1137
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1102 tatatttctcagtataagcgctgcccagtgacgctgatgccttcaacagttgaccag 1158
>gnl|LJGI|BP065734 similar to UniRef100_A7Q841 Cluster: Chromosome undetermined
scaffold_62, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_62, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (7%)
Length = 406
Score = 107 bits (54), Expect = 2e-22
Identities = 78/86 (90%)
Strand = Plus / Minus
Query: 782 cattgcaaggagcattactcagctgttcatacactgtacttgactatgcacaaaccggat 841
|||||||||||||| ||||||||||| |||| ||||||||||||||||||||||| ||||
Sbjct: 296 cattgcaaggagcactactcagctgtacatatactgtacttgactatgcacaaactggat 237
Query: 842 tgattgcagcagtgttcttctttaaa 867
|||||||| || ||||||||||||
Sbjct: 236 tgattgcaacatatttcttctttaaa 211
>gnl|LJGI|BW595372 similar to UniRef100_A7Q841 Cluster: Chromosome undetermined
scaffold_62, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_62, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (7%)
Length = 487
Score = 101 bits (51), Expect = 9e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 782 cattgcaaggagcattactcagctgttcatacactgtacttgactatgcacaaaccggat 841
|||||||||||||| |||||||| || ||||||||||||||||| |||||||||| ||||
Sbjct: 162 cattgcaaggagcactactcagcagtacatacactgtacttgacaatgcacaaactggat 221
Query: 842 tgattgcagca 852
|||||||||||
Sbjct: 222 tgattgcagca 232
>gnl|LJGI|AV772031 similar to UniRef100_A7Q841 Cluster: Chromosome undetermined
scaffold_62, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_62, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (8%)
Length = 599
Score = 95.6 bits (48), Expect = 6e-19
Identities = 63/68 (92%)
Strand = Plus / Minus
Query: 782 cattgcaaggagcattactcagctgttcatacactgtacttgactatgcacaaaccggat 841
|||||||||||||| |||||||| || ||||||||||||||||| |||||||||| ||||
Sbjct: 492 cattgcaaggagcactactcagcagtacatacactgtacttgacaatgcacaaactggat 433
Query: 842 tgattgca 849
||||||||
Sbjct: 432 tgattgca 425
>gnl|LJGI|TC65530 similar to UniRef100_A7Q841 Cluster: Chromosome undetermined
scaffold_62, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_62, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (7%)
Length = 685
Score = 95.6 bits (48), Expect = 6e-19
Identities = 63/68 (92%)
Strand = Plus / Plus
Query: 782 cattgcaaggagcattactcagctgttcatacactgtacttgactatgcacaaaccggat 841
|||||||||||||| |||||||| || ||||||||||||||||| |||||||||| ||||
Sbjct: 286 cattgcaaggagcactactcagcagtacatacactgtacttgacaatgcacaaactggat 345
Query: 842 tgattgca 849
||||||||
Sbjct: 346 tgattgca 353
>gnl|LJGI|TC77698
Length = 603
Score = 85.7 bits (43), Expect = 6e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 868 atgatggaatggtggtaccagtctgctgaggagagaatgtcagctccaacagtatatcct 927
||||||||||| ||||||||||||| |||||||||||| |||||| ||||||||| ||||
Sbjct: 12 atgatggaatgttggtaccagtctgttgaggagagaatatcagcttcaacagtatgtcct 71
Query: 928 cct 930
|||
Sbjct: 72 cct 74
>gnl|LJGI|TC70342 weakly similar to UniRef100_Q6L8U3 Cluster: Auxin response factor
1; n=1; Cucumis sativus|Rep: Auxin response factor 1 -
Cucumis sativus (Cucumber), partial (3%)
Length = 1324
Score = 85.7 bits (43), Expect = 6e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 868 atgatggaatggtggtaccagtctgctgaggagagaatgtcagctccaacagtatatcct 927
||||||||||| ||||||||||||| |||||||||||| |||||| ||||||||| ||||
Sbjct: 762 atgatggaatgttggtaccagtctgttgaggagagaatatcagcttcaacagtatgtcct 821
Query: 928 cct 930
|||
Sbjct: 822 cct 824
>gnl|LJGI|TC73716
Length = 559
Score = 56.0 bits (28), Expect = 5e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 868 atgatggaatggtggtaccagtctgctgaggagagaatgtcagctccaacag 919
||||||||||| || || ||||||||| ||||||||||||||||||||||
Sbjct: 178 atgatggaatgtgggcacaggtctgctgaagagagaatgtcagctccaacag 229