Miyakogusa Predicted Gene

Lj1g3v4998470.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4998470.1 Non Chatacterized Hit- tr|I1NCC3|I1NCC3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.23087
PE,80.83,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
Caleosin,Caleosin,CUFF.33796.1
         (723 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|AV777367 similar to UniRef100_O23959 Cluster: Ca+2-bind...    86   4e-16

>gnl|LJGI|AV777367 similar to UniRef100_O23959 Cluster: Ca+2-binding EF hand protein;
           n=1; Glycine max|Rep: Ca+2-binding EF hand protein -
           Glycine max (Soybean), partial (44%)
          Length = 541

 Score = 85.7 bits (43), Expect = 4e-16
 Identities = 112/135 (82%)
 Strand = Plus / Minus

                                                                       
Query: 562 tttggctgggctgcaagcaaatttgagtggggagttttgtacattctggcaagagatgaa 621
           ||||||||||||||    |||||||| ||||||||| |||||||||| || || ||||| 
Sbjct: 378 tttggctgggctgctgctaaatttgaatggggagttctgtacattctagctagggatgag 319

                                                                       
Query: 622 caaggttttctgtcaaaagaagctgtcaggcgttgttttgatgggagcttgtttgagtat 681
            ||||||| || || ||||||||||| ||  |  | |||||||||||| | |||||||||
Sbjct: 318 gaaggtttcctttccaaagaagctgtgagaagaagctttgatgggagcatttttgagtat 259

                          
Query: 682 tgtgctaaagtgcaa 696
           ||||||||| |||||
Sbjct: 258 tgtgctaaaatgcaa 244