Miyakogusa Predicted Gene

Lj1g3v4998380.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4998380.1 CUFF.33787.1
         (570 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71180 weakly similar to UniRef100_A4RUA2 Cluster: Pre...  1090   0.0  

>gnl|LJGI|TC71180 weakly similar to UniRef100_A4RUA2 Cluster: Predicted protein; n=1;
            Ostreococcus lucimarinus CCE9901|Rep: Predicted protein -
            Ostreococcus lucimarinus (strain CCE9901), partial (17%)
          Length = 1653

 Score = 1090 bits (550), Expect = 0.0
 Identities = 565/570 (99%)
 Strand = Plus / Plus

                                                                        
Query: 1    atggatgtagattggtggaaagctctcgacaggcttgatgaatccctgaagcgttcccat 60
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801  atggatgtagattggtggaaagctctcgacaggcttgatgaatccctgaagcgttcccat 860

                                                                        
Query: 61   gaagcagctcgccgacgtgaagaagttcgccagggagaagaagcggcagcggcgtatgag 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861  gaagcagctcgccgacgtgaagaagttcgccagggagaagaagcggcagcggcgtatgag 920

                                                                        
Query: 121  cgccacgtggccgaatacgagcagtacatggcggcgtacgagcggtacgaagccaaagcg 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 921  cgccacgtggccgaatacgagcagtacatggcggcgtacgagcggtacgaagccaaagcg 980

                                                                        
Query: 181  gcagcggcggcggtagccatggccgaagaagaaaacgcagcggcggtagaacgagaagtg 240
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 981  gcagcggcggcggtagccatggccgaagaagaaaacgcagcggcggtagaacgagaagtg 1040

                                                                        
Query: 241  gaagcagaacgagagcgtgctgcggctgaggctgaagaagatgcagcggagaagtacgaa 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1041 gaagcagaacgagagcgtgctgcggctgaggctgaagaagatgcagcggagaagtacgaa 1100

                                                                        
Query: 301  caatcggcgacggtcaccgtcttcttcggttcttcaaaggcgttttcgtttgggttcttg 360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1101 caatcggcgacggtcaccgtcttcttcggttcttcaaaggcgttttcgtttgggttcttg 1160

                                                                        
Query: 361  aacaaatcctgcgttcttcccaaaatcaacgtcgttcttcctcaattcaatgccgttcta 420
            |||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| ||
Sbjct: 1161 aacaaatcctgcgttcttcccaaaatcagcgtcgttcttcctcaattcgatgccgtttta 1220

                                                                        
Query: 421  ccccaatttcgtgatttagggctcgaaatcgtttttccccaaatcagtgatttaaggttt 480
            ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1221 ccccaattttgtgatttagggctcgaaatcgtttttccccaaatcagtgatttaaggttt 1280

                                                                        
Query: 481  gcggtttcgcccaaaattgggaactctgtgctcagcggtggtgttctaggtgattatggt 540
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1281 gcggtttcgcccaaaattgggaactctgtgctcagcggtggtgttctaggtgattatggt 1340

                                          
Query: 541  ggtgattcagccattgatggagcaggaagg 570
            ||||||||||| ||||||||||||||||||
Sbjct: 1341 ggtgattcagcgattgatggagcaggaagg 1370