Miyakogusa Predicted Gene
- Lj1g3v4997260.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4997260.1 Non Chatacterized Hit- tr|A5C4J5|A5C4J5_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,85.56,0,seg,NULL; DBD_Tnp_Mut,Transposase, MuDR, plant; MULE,MULE
transposase domain; SWIM,Zinc finger, SWIM,CUFF.33778.1
(2265 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP030148 similar to UniRef100_Q9SR14 Cluster: Mutator-l... 789 0.0
gnl|LJGI|TC77948 homologue to UniRef100_Q9SR14 Cluster: Mutator-... 527 e-149
gnl|LJGI|BF177509 homologue to UniRef100_A7PUN8 Cluster: Chromos... 426 e-118
gnl|LJGI|BP049972 similar to UniRef100_Q9SR14 Cluster: Mutator-l... 155 1e-36
>gnl|LJGI|BP030148 similar to UniRef100_Q9SR14 Cluster: Mutator-like transposase; n=1;
Arabidopsis thaliana|Rep: Mutator-like transposase -
Arabidopsis thaliana (Mouse-ear cress), partial (17%)
Length = 398
Score = 789 bits (398), Expect = 0.0
Identities = 398/398 (100%)
Strand = Plus / Plus
Query: 1295 acactgaaaacatgccacggcttacaattttgtctgacaggcagaaggggattgtggatg 1354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acactgaaaacatgccacggcttacaattttgtctgacaggcagaaggggattgtggatg 60
Query: 1355 gtgtggaagcgaatttcccaacggctttccatggattttgcatgcgccacttgagtgaca 1414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgtggaagcgaatttcccaacggctttccatggattttgcatgcgccacttgagtgaca 120
Query: 1415 gctttcgcaaggagtttaataacaccatgcttgttaatcttctgtgggaagcagctcatg 1474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gctttcgcaaggagtttaataacaccatgcttgttaatcttctgtgggaagcagctcatg 180
Query: 1475 ttcttactgtgattgaatttgaatccaaaatcttagagattgaggagatatcacaagatg 1534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttcttactgtgattgaatttgaatccaaaatcttagagattgaggagatatcacaagatg 240
Query: 1535 ccgcatactggattcgaagaattccacctcgcttgtgggccactgcatactttgaggggc 1594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ccgcatactggattcgaagaattccacctcgcttgtgggccactgcatactttgaggggc 300
Query: 1595 aaaggtttggtcacttgacagctaacatagttgaatccttagacacatggatattagatg 1654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaaggtttggtcacttgacagctaacatagttgaatccttagacacatggatattagatg 360
Query: 1655 catcagggcttcccatagttcaaatgacggaatgcatc 1692
||||||||||||||||||||||||||||||||||||||
Sbjct: 361 catcagggcttcccatagttcaaatgacggaatgcatc 398
>gnl|LJGI|TC77948 homologue to UniRef100_Q9SR14 Cluster: Mutator-like transposase; n=1;
Arabidopsis thaliana|Rep: Mutator-like transposase -
Arabidopsis thaliana (Mouse-ear cress), partial (11%)
Length = 573
Score = 527 bits (266), Expect = e-149
Identities = 266/266 (100%)
Strand = Plus / Plus
Query: 2000 ctgttgccacttatcgcaagacatactcacaaaccatacatccaattcctgataagtctt 2059
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgttgccacttatcgcaagacatactcacaaaccatacatccaattcctgataagtctt 60
Query: 2060 tgtggaaggagttgtctgagggggatgaaaatgcggccaaagctgatcaagttcttatca 2119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgtggaaggagttgtctgagggggatgaaaatgcggccaaagctgatcaagttcttatca 120
Query: 2120 acccacccaaatcactcaggccacctggaaggcctagaaagaagcgagttcgcgccgaag 2179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acccacccaaatcactcaggccacctggaaggcctagaaagaagcgagttcgcgccgaag 180
Query: 2180 accgtggacgtgtgaagagggtggtgcattgtagtcgttgcaatcaaacaggtcacttta 2239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 accgtggacgtgtgaagagggtggtgcattgtagtcgttgcaatcaaacaggtcacttta 240
Query: 2240 ggaccacatgtgcagctcccatctag 2265
||||||||||||||||||||||||||
Sbjct: 241 ggaccacatgtgcagctcccatctag 266
>gnl|LJGI|BF177509 homologue to UniRef100_A7PUN8 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 426
Score = 426 bits (215), Expect = e-118
Identities = 368/419 (87%)
Strand = Plus / Plus
Query: 1543 tggattcgaagaattccacctcgcttgtgggccactgcatactttgaggggcaaaggttt 1602
|||||||||||||||||||||||| |||||||||| || || ||||||||||||||||||
Sbjct: 5 tggattcgaagaattccacctcgcctgtgggccacggcttattttgaggggcaaaggttt 64
Query: 1603 ggtcacttgacagctaacatagttgaatccttagacacatggatattagatgcatcaggg 1662
|||||||||||||||||||| |||||||| ||| |||| |||||||| || ||||| |||
Sbjct: 65 ggtcacttgacagctaacattgttgaatctttaaacacttggatattggaagcatctggg 124
Query: 1663 cttcccatagttcaaatgacggaatgcatcaggaggcagctaatgacttggttcaatgag 1722
||||||||| | ||||||| ||||||||| || |||||||||||||||||||||||||||
Sbjct: 125 cttcccataatccaaatgatggaatgcattagaaggcagctaatgacttggttcaatgag 184
Query: 1723 cgaagagagaccagcatgcagtggacatccatacttgtaccttctgctgagagacacgtt 1782
|| | |||||||||||||||||| | || || ||||||||||||||||||||| |||
Sbjct: 185 cgccgcgagaccagcatgcagtgggcctcaattcttgtaccttctgctgagagatgtgtt 244
Query: 1783 gcagaggctcttgaacgtgcacgaacatatcaggtacttcgcgccaacgaagctgaattc 1842
|| |||||||||||||| || || ||||||||||| ||||| ||||| |||||||| ||
Sbjct: 245 gctgaggctcttgaacgcgcgcgcacatatcaggttcttcgtgccaatgaagctgagttt 304
Query: 1843 gaggtcatatctcatgaaggaacaaacattgttgatatcagaaatcgttgctgtctttgt 1902
|| ||||||||||||||||| ||||||| ||||||||||| || |||||||| |||||
Sbjct: 305 gaagtcatatctcatgaagggtcaaacatagttgatatcaggaaccgttgctgcctttgc 364
Query: 1903 cgcgggtggcagctttatggtttgccttgtgcacatgctgtggctgcacttctttcctg 1961
|| || |||||||| ||||| ||||| ||||||||||||||||| ||||| || |||||
Sbjct: 365 cgtggctggcagctctatggcttgccgtgtgcacatgctgtggcagcactcctctcctg 423
>gnl|LJGI|BP049972 similar to UniRef100_Q9SR14 Cluster: Mutator-like transposase; n=1;
Arabidopsis thaliana|Rep: Mutator-like transposase -
Arabidopsis thaliana (Mouse-ear cress), partial (13%)
Length = 496
Score = 155 bits (78), Expect = 1e-36
Identities = 132/150 (88%)
Strand = Plus / Minus
Query: 2114 ttatcaacccacccaaatcactcaggccacctggaaggcctagaaagaagcgagttcgcg 2173
|||| |||||||| |||||||| ||||| || ||||| || ||||||||||||||||| |
Sbjct: 330 ttattaacccacctaaatcactgaggcctccaggaagaccaagaaagaagcgagttcgtg 271
Query: 2174 ccgaagaccgtggacgtgtgaagagggtggtgcattgtagtcgttgcaatcaaacaggtc 2233
| |||||||| || ||||| ||| | ||||||||||||||||| |||||||||||||| |
Sbjct: 270 cagaagaccgcgggcgtgttaagcgtgtggtgcattgtagtcgctgcaatcaaacaggac 211
Query: 2234 actttaggaccacatgtgcagctcccatct 2263
||||||| |||||||||||||| |||||||
Sbjct: 210 actttagaaccacatgtgcagcacccatct 181
Score = 133 bits (67), Expect = 5e-30
Identities = 91/99 (91%)
Strand = Plus / Minus
Query: 1978 agattcacagaaagctgtttcactgttgccacttatcgcaagacatactcacaaaccata 2037
|||||||| |||||||||||||| ||||| |||||||||||||||||||| |||||||||
Sbjct: 493 agattcactgaaagctgtttcacggttgcaacttatcgcaagacatactcccaaaccata 434
Query: 2038 catccaattcctgataagtctttgtggaaggagttgtct 2076
|||||||||||||||| ||||| ||||| |||||||||
Sbjct: 433 catccaattcctgatagatctttctggaatgagttgtct 395