Miyakogusa Predicted Gene
- Lj1g3v4979970.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4979970.1 tr|B9VU69|B9VU69_9FABA
GDP-mannose-3',5'-epimerase OS=Caragana korshinskii GN=GME PE=2
SV=1,91.8,0,no description,NAD(P)-binding domain; NAD(P)-binding
Rossmann-fold domains,NULL; Epimerase,NAD-depen,CUFF.33774.1
(1137 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64106 homologue to UniRef100_A7Q613 Cluster: Chromoso... 2204 0.0
gnl|LJGI|TC74573 homologue to UniRef100_A7NWY2 Cluster: Chromoso... 959 0.0
gnl|LJGI|GO011149 homologue to UniRef100_A5JPK5 Cluster: GDP-man... 188 5e-47
gnl|LJGI|AV772059 weakly similar to UniRef100_A0EJL8 Cluster: GD... 119 4e-26
gnl|LJGI|BP067681 UniRef100_A2Z7B3 Cluster: GDP-mannose 3 5-epim... 52 8e-06
>gnl|LJGI|TC64106 homologue to UniRef100_A7Q613 Cluster: Chromosome chr14 scaffold_54,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr14 scaffold_54, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (98%)
Length = 1617
Score = 2204 bits (1112), Expect = 0.0
Identities = 1129/1137 (99%)
Strand = Plus / Plus
Query: 1 atgggaagttctggagcagaagctgattatggtgcatacacctacaaggagcttgagaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 atgggaagttctggagcagaagctgattatggtgcatacacctacaaggagcttgagaga 286
Query: 61 gagccttactggccatctgagaagctgaggatttcaatcactggtgctggtggttttatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 gagccttactggccatctgagaagctgaggatttcaatcactggtgctggtggttttatt 346
Query: 121 gcctcacacattgctcgccgtctcaagagtgaggggcattacatcattgcttctgattgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 gcctcacacattgctcgccgtctcaagagtgaggggcattacatcattgcttctgattgg 406
Query: 181 aagacaaatgaacacatgactgaagacatgttctgccatgagttccatctgattgatctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 aagacaaatgaacacatgactgaagacatgttctgccatgagttccatctgattgatctt 466
Query: 241 agggtcatggataactgcctcaaagttaccaatggtgtggatcatgttttcaatcttgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 agggtcatggataactgcctcaaagttaccaatggtgtggatcatgttttcaatcttgct 526
Query: 301 gctgatatgggtgggatggggtttatccagtccaaccactctgtcattatgtacaacaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 gctgatatgggtgggatggggtttatccagtccaaccactctgtcattatgtacaacaac 586
Query: 361 accatgattagcttcaacatgattgaggctggaaggatcaatggtgtgaagaggnnnnnn 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 accatgattagcttcaacatgattgaggctggaaggatcaatggtgtgaagaggtttttt 646
Query: 421 natgcctctagtgcttgtatctaccctgaatttaagcagctggaaactaccaatgtcagt 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 tatgcctctagtgcttgtatctaccctgaatttaagcagctggaaactaccaatgtcagt 706
Query: 481 ttgaaggaggctgatgcctggcctgctgagccacaagatgcatatggtctagagaagctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 ttgaaggaggctgatgcctggcctgctgagccacaagatgcatatggtctagagaagctt 766
Query: 541 gcaacagaagagttgtgcaagcattataacaaggattttgggattgagtgccgaattggg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 gcaacagaagagttgtgcaagcattataacaaggattttgggattgagtgccgaattggg 826
Query: 601 aggttccacaacatttatggcccttatgggacatggaaaggtggaagggagaaggctcct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 aggttccacaacatttatggcccttatgggacatggaaaggtggaagggagaaggctcct 886
Query: 661 gctgctttttgtcgaaaggcgcttacttctgctgacagatttgagatgtggggagatgga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887 gctgctttttgtcgaaaggcgcttacttctgctgacagatttgagatgtggggagatgga 946
Query: 721 ttacaaacaagatccttcacctttattgatgagtgcgttgaaggcgtacttagattgact 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 947 ttacaaacaagatccttcacctttattgatgagtgcgttgaaggcgtacttagattgact 1006
Query: 781 aaatcagacttccgggagccagtgaatattggaagtgatgaaatggtcagcatgaatgag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1007 aaatcagacttccgggagccagtgaatattggaagtgatgaaatggtcagcatgaatgag 1066
Query: 841 atggctgacattgtgcttggctttgagaacaaaagcacaccagtgcaccacattcctggc 900
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 1067 atggctgacattgtgcttggctttgagaacaaaagcacaccagtacaccacattcctggc 1126
Query: 901 ccagagggtgtccgaggccgtaattcagacaatacactaatcaaagagaaacttggctgg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1127 ccagagggtgtccgaggccgtaattcagacaatacactaatcaaagagaaacttggctgg 1186
Query: 961 gctccaacaatgaagttgaaggatgggctgagaattacatacttttggatcaaagaacag 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1187 gctccaacaatgaagttgaaggatgggctgagaattacatacttttggatcaaagaacag 1246
Query: 1021 cttgagaaagagaaggccaaaggtgttgatacagcaatctatggatcttccaaagtagta 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1247 cttgagaaagagaaggccaaaggtgttgatacagcaatctatggatcttccaaagtagta 1306
Query: 1081 cagactcaagccccagttcaactaggctcactccgggcagcagatggcaaagaatga 1137
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1307 cagactcaagccccagttcaactaggctcactccgggcagcagatggcaaagaatga 1363
>gnl|LJGI|TC74573 homologue to UniRef100_A7NWY2 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape), complete
Length = 1597
Score = 959 bits (484), Expect = 0.0
Identities = 956/1115 (85%), Gaps = 3/1115 (0%)
Strand = Plus / Plus
Query: 23 ctgattatggtgcatacacctacaaggagcttgagagagagccttactggccatctgaga 82
|||| ||||||| ||||||||| || | |||||||| |||| |||||||||||| || |
Sbjct: 105 ctgactatggtgaatacacctatgagaaccttgagagggagctttactggccatcggaaa 164
Query: 83 agctgaggatttcaatcactggtgctggtggttttattgcctcacacattgctcgccgtc 142
|||| | |||||| |||||||| ||||| |||||||| || || |||||||| || || |
Sbjct: 165 agcttaagatttccatcactggagctgggggttttatcgcatcgcacattgcgcggcgcc 224
Query: 143 tcaagagtgaggggcattacatcattgcttctgattggaagacaaatgaacacatgactg 202
|||||| ||||||||| ||||| ||||| || || ||||| | |||||| ||||||| ||
Sbjct: 225 tcaagactgaggggcactacattattgcctcggactggaaaaaaaatgagcacatgagtg 284
Query: 203 aagacatgttctgccatgagttccatctgattgatcttagggtcatggataactgcctca 262
| |||||||| || |||| || ||||| ||||||| ||||||||||||||||||||||
Sbjct: 285 aggacatgttttgtgatgaatttcatcttgttgatctcagggtcatggataactgcctca 344
Query: 263 aagttaccaatggtgtggatcatgttttcaatcttgctgctgatatgggtgggatggggt 322
| || || || || || ||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 345 aggtcactaagggggttgatcatgttttcaatctcgctgctgatatgggtgggatgggtt 404
Query: 323 ttatccagtccaaccactctgtcattatgtacaacaacaccatgattagcttcaacatga 382
|||| ||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||
Sbjct: 405 ttattcagtccaaccactctgtgattatgtacaacaacacaatgattagtttcaacatga 464
Query: 383 ttgaggctggaaggatcaatggtgtgaagaggnnnnnnnatgcctctagtgcttgtatct 442
||||||||| ||||| ||||| | |||||| |||| ||||||||||||||||
Sbjct: 465 ttgaggctgccaggattaatggcattaagaggtttttttatgcttctagtgcttgtatct 524
Query: 443 accctgaatttaagcagctggaaactaccaatgtcagtttgaaggaggctgatgcctggc 502
| |||||||| || ||| ||||||||| |||| || ||||||||||||||||| ||||
Sbjct: 525 atcctgaattcaaacagttggaaacta---atgtgagcttgaaggaggctgatgcatggc 581
Query: 503 ctgctgagccacaagatgcatatggtctagagaagcttgcaacagaagagttgtgcaagc 562
| ||||||||||||||||||||||| ||||||||||| |||||||| ||||| |||||||
Sbjct: 582 cagctgagccacaagatgcatatggactagagaagctcgcaacagaggagttatgcaagc 641
Query: 563 attataacaaggattttgggattgagtgccgaattgggaggttccacaacatttatggcc 622
| |||||||| |||||||| ||||| || || |||||||||||||| ||||| |||||||
Sbjct: 642 actataacaaagattttggaattgaatgtcgcattgggaggttccataacatatatggcc 701
Query: 623 cttatgggacatggaaaggtggaagggagaaggctcctgctgctttttgtcgaaaggcgc 682
||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 702 cttttggaacatggaaaggtggaagggagaaggctcctgctgctttttgtcgaaagacaa 761
Query: 683 ttacttctgctgacagatttgagatgtggggagatggattacaaacaagatccttcacct 742
| |||||| |||||||||||||||||||||||||||| || ||||| |||| |||||||
Sbjct: 762 tcacttctactgacagatttgagatgtggggagatggtttgcaaacgcgatcattcacct 821
Query: 743 ttattgatgagtgcgttgaaggcgtacttagattgactaaatcagacttccgggagccag 802
| |||||||| || |||||||| || ||||||||||||||||| |||||||| |||||||
Sbjct: 822 tcattgatgaatgtgttgaaggtgttcttagattgactaaatccgacttccgtgagccag 881
Query: 803 tgaatattggaagtgatgaaatggtcagcatgaatgagatggctgacattgtgcttggct 862
| ||||||||||||||||| |||||||||||||||||||||||||| ||||| || |||
Sbjct: 882 taaatattggaagtgatgagatggtcagcatgaatgagatggctgagattgttctcagct 941
Query: 863 ttgagaacaaaagcacaccagtgcaccacattcctggcccagagggtgtccgaggccgta 922
|||||||||| | | || | || ||||||||||| ||||||||||| || || ||||
Sbjct: 942 ttgagaacaagaatattcctatacatcacattcctggaccagagggtgttcgtggtcgta 1001
Query: 923 attcagacaatacactaatcaaagagaaacttggctgggctccaacaatgaagttgaagg 982
| ||||| |||||||| || |||||||||||||||||||||||||||||||| |||||||
Sbjct: 1002 actcagataatacactgataaaagagaaacttggctgggctccaacaatgaaattgaagg 1061
Query: 983 atgggctgagaattacatacttttggatcaaagaacagcttgagaaagagaaggccaaag 1042
|||||||||| |||||||| || ||||| || || |||||||| || |||||||| ||||
Sbjct: 1062 atgggctgaggattacatatttctggattaaggagcagcttgacaaggagaaggctaaag 1121
Query: 1043 gtgttgatacagcaatctatggatcttccaaagtagtacagactcaagccccagttcaac 1102
|| ||||| |||| | |||||| | ||||| || || || || ||||||||||||||||
Sbjct: 1122 gtattgatttagcagtttatggaacatccaaggtggtgcaaacccaagccccagttcaac 1181
Query: 1103 taggctcactccgggcagcagatggcaaagaatga 1137
|||| ||||| || || ||||| || |||||||||
Sbjct: 1182 taggatcacttcgtgctgcagacggaaaagaatga 1216
>gnl|LJGI|GO011149 homologue to UniRef100_A5JPK5 Cluster: GDP-mannose-3',5'-epimerase;
n=1; Vitis vinifera|Rep: GDP-mannose-3',5'-epimerase -
Vitis vinifera (Grape), partial (19%)
Length = 542
Score = 188 bits (95), Expect = 5e-47
Identities = 185/215 (86%)
Strand = Plus / Plus
Query: 736 ttcacctttattgatgagtgcgttgaaggcgtacttagattgactaaatcagacttccgg 795
|||||||| |||||||| || |||||||| || ||||||||||||||||| ||||||||
Sbjct: 3 ttcaccttcattgatgaatgtgttgaaggtgttcttagattgactaaatccgacttccgt 62
Query: 796 gagccagtgaatattggaagtgatgaaatggtcagcatgaatgagatggctgacattgtg 855
|||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||
Sbjct: 63 gagccagtaaatattggaagtgatgagatggtcagcatgaatgagatggctgagattgtt 122
Query: 856 cttggctttgagaacaaaagcacaccagtgcaccacattcctggcccagagggtgtccga 915
|| ||||||||||||| | | || | || ||||||||||| ||||||||||| ||
Sbjct: 123 ctcagctttgagaacaagaatattcctatacatcacattcctggaccagagggtgttcgt 182
Query: 916 ggccgtaattcagacaatacactaatcaaagagaa 950
|| ||||| ||||| |||||||| || ||||||||
Sbjct: 183 ggtcgtaactcagataatacactgataaaagagaa 217
>gnl|LJGI|AV772059 weakly similar to UniRef100_A0EJL8 Cluster:
GDP-D-mannose-3',5'-epimerase; n=1; Malpighia glabra|Rep:
GDP-D-mannose-3',5'-epimerase - Malpighia glabra
(Barbados cherry), partial (12%)
Length = 427
Score = 119 bits (60), Expect = 4e-26
Identities = 121/140 (86%), Gaps = 1/140 (0%)
Strand = Plus / Minus
Query: 999 atacttttggatcaaagaacagcttgagaaagagaaggccaaaggtgttgatacagcaat 1058
|||| |||||||| ||||||||| | || ||||||||||| |||| || |||||||| ||
Sbjct: 405 atacatttggatccaagaacagcctcagtaagagaaggcccaaggcgtggatacagccat 346
Query: 1059 ctatggatcttccaaagtagtacagactcaagccccagttcaactaggctcactccgggc 1118
|| |||||| ||| |||||||||||||||||||||| || | |||||||||||||| |||
Sbjct: 345 ctctggatcgtcccaagtagtacagactcaagcccccgtcccactaggctcactcccggc 286
Query: 1119 a-gcagatggcaaagaatga 1137
| || |||||| ||||||||
Sbjct: 285 acgccgatggccaagaatga 266
>gnl|LJGI|BP067681 UniRef100_A2Z7B3 Cluster: GDP-mannose 3 5-epimerase 1; n=1; Oryza
sativa Indica Group|Rep: GDP-mannose 3 5-epimerase,
partial (2%)
Length = 617
Score = 52.0 bits (26), Expect = 8e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 957 ctgggctccaacaatgaagttgaaggatgggctg 990
|||||||||||| ||||| |||||||||||||||
Sbjct: 617 ctgggctccaaccatgaaattgaaggatgggctg 584