Miyakogusa Predicted Gene
- Lj1g3v4958860.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4958860.1 Non Chatacterized Hit- tr|I1NC89|I1NC89_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,67.04,0,CoA-dependent
acyltransferases,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; Transferase,Tr,CUFF.33748.1
(1359 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV410499 weakly similar to UniRef100_A7Q5Z0 Cluster: Ch... 583 e-165
gnl|LJGI|AV419605 weakly similar to UniRef100_A7Q5Z0 Cluster: Ch... 404 e-112
gnl|LJGI|AV428850 244 1e-63
gnl|LJGI|FS356666 similar to UniRef100_A7Q5Z0 Cluster: Chromosom... 188 6e-47
>gnl|LJGI|AV410499 weakly similar to UniRef100_A7Q5Z0 Cluster: Chromosome chr14
scaffold_54, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_54, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 331
Score = 583 bits (294), Expect = e-165
Identities = 294/294 (100%)
Strand = Plus / Plus
Query: 1 atgtcgtccagggtaaccgttttctcaaaactcacggcggtttccagcaaaccagtccgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 atgtcgtccagggtaaccgttttctcaaaactcacggcggtttccagcaaaccagtccgg 97
Query: 61 tcaggtatgacccataccttgtcggcaatggaccatgccatgggtttccactcacttcac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 tcaggtatgacccataccttgtcggcaatggaccatgccatgggtttccactcacttcac 157
Query: 121 atcgtgttctactacgagaacgaggacaacttgctggagtcgtttgaactggactcgttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 atcgtgttctactacgagaacgaggacaacttgctggagtcgtttgaactggactcgttg 217
Query: 181 agggagtcactgtgtgaggttctcacggagtacccgacgatgaccggtcggttggctcga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 agggagtcactgtgtgaggttctcacggagtacccgacgatgaccggtcggttggctcga 277
Query: 241 gatggagatgggaactgggaagtgaggtgcaatgatgctggtgttcgggtcatc 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 gatggagatgggaactgggaagtgaggtgcaatgatgctggtgttcgggtcatc 331
>gnl|LJGI|AV419605 weakly similar to UniRef100_A7Q5Z0 Cluster: Chromosome chr14
scaffold_54, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_54, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (11%)
Length = 206
Score = 404 bits (204), Expect = e-112
Identities = 204/204 (100%)
Strand = Plus / Plus
Query: 339 gtcggcttcgcagcaggcgcgactaatcgcttgggatcatatgcccgatgatcccagcac 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gtcggcttcgcagcaggcgcgactaatcgcttgggatcatatgcccgatgatcccagcac 62
Query: 399 ttggtcgccctttcgaattcagataaacagcttcaaagatggaggtcttgcaataggact 458
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 ttggtcgccctttcgaattcagataaacagcttcaaagatggaggtcttgcaataggact 122
Query: 459 aagctgtaaccacatgcttgctgatctaacctgcgcagcatcattcttcaattcatggac 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 aagctgtaaccacatgcttgctgatctaacctgcgcagcatcattcttcaattcatggac 182
Query: 519 tgaaactcaccggcaaaaacccat 542
||||||||||||||||||||||||
Sbjct: 183 tgaaactcaccggcaaaaacccat 206
>gnl|LJGI|AV428850
Length = 127
Score = 244 bits (123), Expect = 1e-63
Identities = 126/127 (99%)
Strand = Plus / Minus
Query: 1085 gtgtttccatggaacacatggtggaggcagagtcgtcgttgctgtatgcagcaatgttta 1144
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 gtgtttccatggaacacatggtggaggcagagtcgtcgttgctgtatgcagcaatgttta 68
Query: 1145 gcaataatgagaagccagttcatgtttcttgtcacatggggaaggtggagggtgaaggtt 1204
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 67 gcaataatgagaagccagttcatgtttcttgtcacatggggaaggtggagggtaaaggtt 8
Query: 1205 tgatcat 1211
|||||||
Sbjct: 7 tgatcat 1
>gnl|LJGI|FS356666 similar to UniRef100_A7Q5Z0 Cluster: Chromosome chr14 scaffold_54,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_54, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 712
Score = 188 bits (95), Expect = 6e-47
Identities = 95/95 (100%)
Strand = Plus / Minus
Query: 1265 cggaggaagaacttgctgaactaagcaaggatgaagcgatattgcagctggagccaactg 1324
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 712 cggaggaagaacttgctgaactaagcaaggatgaagcgatattgcagctggagccaactg 653
Query: 1325 tgatccttgctggttgtggggcagaacattgattg 1359
|||||||||||||||||||||||||||||||||||
Sbjct: 652 tgatccttgctggttgtggggcagaacattgattg 618