Miyakogusa Predicted Gene
- Lj1g3v4957760.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4957760.1 Non Chatacterized Hit- tr|I1Q8L6|I1Q8L6_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,42.42,0.000000000000001,PROTEIN BICAUDAL D HOMOLOG 2 (BIC-D 2)
[SOURCE:UNIPROTKB/SWISS-PROT,ACC:Q8TD16],NULL;
SERINE/THREONI,CUFF.33752.1
(936 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75468 similar to UniRef100_A7NWM6 Cluster: Chromosome... 1855 0.0
gnl|LJGI|TC72052 similar to UniRef100_A7NWM6 Cluster: Chromosome... 68 1e-10
>gnl|LJGI|TC75468 similar to UniRef100_A7NWM6 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 1167
Score = 1855 bits (936), Expect = 0.0
Identities = 936/936 (100%)
Strand = Plus / Plus
Query: 1 atggacacagcattaagtgtagcaacggaaatggttgcggaactagacattactgatcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 atggacacagcattaagtgtagcaacggaaatggttgcggaactagacattactgatcag 105
Query: 61 gatgtttccagaatagcagatatgatagatggggaaattgcttctttggtacctgaatgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 gatgtttccagaatagcagatatgatagatggggaaattgcttctttggtacctgaatgg 165
Query: 121 aggccagggccaggaattgaggaaactacccattttgcaaatcaaaatttctgtatcaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 aggccagggccaggaattgaggaaactacccattttgcaaatcaaaatttctgtatcaat 225
Query: 181 tgcgtgtctaatcatgcttctgggggcactgatatggacttaatgtcacatagccagggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 tgcgtgtctaatcatgcttctgggggcactgatatggacttaatgtcacatagccagggt 285
Query: 241 ggaaatggaaagaacttgcagcttcttcaatgctgcaggcatggatgcgcttcaatgcac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 ggaaatggaaagaacttgcagcttcttcaatgctgcaggcatggatgcgcttcaatgcac 345
Query: 301 gggcggtttgaggagattaccttccaatctgaggagtatgacaaccatgttacagaggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 gggcggtttgaggagattaccttccaatctgaggagtatgacaaccatgttacagaggat 405
Query: 361 gctcctaacatatcaagccaatcagactgcttgcagtatcaggagtcatggaatcatcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gctcctaacatatcaagccaatcagactgcttgcagtatcaggagtcatggaatcatcat 465
Query: 421 gaaagccgggaacttagtccggtcgagtctgttcgaagccattctgatgatcaatatgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 gaaagccgggaacttagtccggtcgagtctgttcgaagccattctgatgatcaatatgaa 525
Query: 481 cacttagataaatcagcattagcagaagataaaggacatgatgtttgggaaaacaatgtt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 cacttagataaatcagcattagcagaagataaaggacatgatgtttgggaaaacaatgtt 585
Query: 541 gagaatgagtatgagaaagagatccaacaagagctgagatggctcagagcaaaataccaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 gagaatgagtatgagaaagagatccaacaagagctgagatggctcagagcaaaataccaa 645
Query: 601 atggaattaatggaactgaaggataaacagcttggtcttgcagctacagctgacagaaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 atggaattaatggaactgaaggataaacagcttggtcttgcagctacagctgacagaaag 705
Query: 661 cagcataaaacagaacaagactttatggcacttccgctgacagaaacagcaaaagaggat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 cagcataaaacagaacaagactttatggcacttccgctgacagaaacagcaaaagaggat 765
Query: 721 catgggattcatttgaaaccctttgggaataactggaactgtgattctagttgtgagtct 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 catgggattcatttgaaaccctttgggaataactggaactgtgattctagttgtgagtct 825
Query: 781 caagtccaaaagagccaccccaatttggacacccaaagggcccaaaattgtgaggtgatg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 caagtccaaaagagccaccccaatttggacacccaaagggcccaaaattgtgaggtgatg 885
Query: 841 tgttctcatggagaaggtatggtcactgctaagagtttttacaccggcactctacacagg 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886 tgttctcatggagaaggtatggtcactgctaagagtttttacaccggcactctacacagg 945
Query: 901 acagtttcccttccagttgatgctgtggatgtgtaa 936
||||||||||||||||||||||||||||||||||||
Sbjct: 946 acagtttcccttccagttgatgctgtggatgtgtaa 981
>gnl|LJGI|TC72052 similar to UniRef100_A7NWM6 Cluster: Chromosome chr5 scaffold_2,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 836
Score = 67.9 bits (34), Expect = 1e-10
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 545 atgagtatgagaaagagatccaacaagagctgagatggctcagagcaaaataccaaatgg 604
|||| |||| ||||||||| ||| || ||||||||||||| |||||||||||||||||
Sbjct: 146 atgactatgggaaagagattcaaacggaactgagatggctcaaagcaaaataccaaatgg 205
Query: 605 aattaatggaactgaaggataaacag 630
| |||| |||| | |||||| |||||
Sbjct: 206 agttaagggaaatcaaggatcaacag 231
Score = 60.0 bits (30), Expect = 3e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 895 cacaggacagtttcccttccagttgatgctgtggatgt 932
||||||||||||||||| |||||||||||||| |||||
Sbjct: 472 cacaggacagtttccctcccagttgatgctgttgatgt 509
Score = 58.0 bits (29), Expect = 1e-07
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 484 ttagataaatcagcattagcagaagataaaggacatgatgtttgggaaaacaa 536
||||||||| ||| || ||| |||||||||||||| |||||||| ||||||||
Sbjct: 7 ttagataaaacagtatcagctgaagataaaggacaggatgtttgtgaaaacaa 59