Miyakogusa Predicted Gene
- Lj1g3v4955480.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4955480.1 Non Chatacterized Hit- tr|D8SA29|D8SA29_SELML
Putative uncharacterized protein OS=Selaginella
moelle,40.13,1e-18,seg,NULL; no description,NULL; SEC-C,SEC-C
motif,CUFF.33723.1
(645 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59820 similar to UniRef100_A7Q5T3 Cluster: Chromosome... 1253 0.0
gnl|LJGI|TC78647 weakly similar to UniRef100_A7Q5T3 Cluster: Chr... 264 6e-70
>gnl|LJGI|TC59820 similar to UniRef100_A7Q5T3 Cluster: Chromosome chr14 scaffold_54,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_54, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (76%)
Length = 939
Score = 1253 bits (632), Expect = 0.0
Identities = 642/644 (99%), Gaps = 1/644 (0%)
Strand = Plus / Plus
Query: 1 atggctgcaactcgcatcacaatcgcaaacaagattcatcatcgtctttcccagtactcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9 atggctgcaactcgcatcacaatcgcaaacaagattcatcatcgtctttcccagtactcc 68
Query: 61 aactccaggtccatcttctccactccgcagttgcagaattcatgggtcgacaaggtcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 aactccaggtccatcttctccactccgcagttgcagaattcatgggtcgacaaggtcaaa 128
Query: 121 accgtcttcaccggccaaaaaaccaccaccaccactgaaaacccctcctccaccaccgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 accgtcttcaccggccaaaaaaccaccaccaccactgaaaacccctcctccaccaccgac 188
Query: 181 tcattcaccctcctccatttcgccgatgaaatgaagaaggcacggaaaatcggagcattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 tcattcaccctcctccatttcgccgatgaaatgaagaaggcacggaaaatcggagcattc 248
Query: 241 aaggattacgtggttgggagaagcagcgaagtcactttcactaccgcattcgagaaaaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 aaggattacgtggttgggagaagcagcgaagtcactttcactaccgcattcgagaaaaac 308
Query: 301 gaagccattattcgatttctcggtgttttggatcctactggagagaagctccagagtgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gaagccattattcgatttctcggtgttttggatcctactggagagaagctccagagtgct 368
Query: 361 cagaaacaagcggccgcgaagcattgtaactgcaccattattgatgtggagaatgcgctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 cagaaacaagcggccgcgaagcattgtaactgcaccattattgatgtggagaatgcgctt 428
Query: 421 gccaagtttacttgggctaaagaggcgcagaagaagattgagaagttgaaagaagaagga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gccaagtttacttgggctaaagaggcgcagaagaagattgagaagttgaaagaagaagga 488
Query: 481 aaacccatgccaacaagcattgctgaggtccaaaagctggttggttcaagtccattggat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 aaacccatgccaacaagcattgctgaggtccaaaagctggttggttcaagtccattggat 548
Query: 541 catgcaaggtctaatttggctcaaagtggacaaattagcaggaatgcaccatgtccatgt 600
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 549 catgcaaggtctaatttggctcaaagtggacaaattagcaggaatgcaccgtgtccatgt 608
Query: 601 ggttcaaaaaagagatataaaagatgctgtgcaaaggattgaag 644
||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 609 ggttc-aaaaagagatataaaagatgctgtgcaaaggattgaag 651
>gnl|LJGI|TC78647 weakly similar to UniRef100_A7Q5T3 Cluster: Chromosome chr14
scaffold_54, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_54, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (11%)
Length = 339
Score = 264 bits (133), Expect = 6e-70
Identities = 133/133 (100%)
Strand = Plus / Plus
Query: 197 atttcgccgatgaaatgaagaaggcacggaaaatcggagcattcaaggattacgtggttg 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 atttcgccgatgaaatgaagaaggcacggaaaatcggagcattcaaggattacgtggttg 266
Query: 257 ggagaagcagcgaagtcactttcactaccgcattcgagaaaaacgaagccattattcgat 316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ggagaagcagcgaagtcactttcactaccgcattcgagaaaaacgaagccattattcgat 326
Query: 317 ttctcggtgtttt 329
|||||||||||||
Sbjct: 327 ttctcggtgtttt 339
Score = 258 bits (130), Expect = 4e-68
Identities = 130/130 (100%)
Strand = Plus / Plus
Query: 67 aggtccatcttctccactccgcagttgcagaattcatgggtcgacaaggtcaaaaccgtc 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 aggtccatcttctccactccgcagttgcagaattcatgggtcgacaaggtcaaaaccgtc 62
Query: 127 ttcaccggccaaaaaaccaccaccaccactgaaaacccctcctccaccaccgactcattc 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 ttcaccggccaaaaaaccaccaccaccactgaaaacccctcctccaccaccgactcattc 122
Query: 187 accctcctcc 196
||||||||||
Sbjct: 123 accctcctcc 132