Miyakogusa Predicted Gene

Lj1g3v4955410.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj1g3v4955410.1 Non Chatacterized Hit- tr|I1JRJ3|I1JRJ3_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.22980
PE,85.56,0,seg,NULL; EXPORTIN 5,NULL; EXPORTIN 1/5,NULL; ARM
repeat,Armadillo-type fold,CUFF.33716.1
         (2994 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC82006 similar to UniRef100_A7Q5S1 Cluster: Chromosome...   517   e-145

>gnl|LJGI|TC82006 similar to UniRef100_A7Q5S1 Cluster: Chromosome chr14 scaffold_54,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr14 scaffold_54, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (7%)
          Length = 684

 Score =  517 bits (261), Expect = e-145
 Identities = 261/261 (100%)
 Strand = Plus / Plus

                                                                        
Query: 2734 ttgctgtctcttccctctattacccctcatgatttgcatgcctttgaggaatctttaacg 2793
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    ttgctgtctcttccctctattacccctcatgatttgcatgcctttgaggaatctttaacg 60

                                                                        
Query: 2794 aaaacagccagtccaaaggagcaaaagcagctcatgaaaagcttgcttcagttagcaact 2853
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   aaaacagccagtccaaaggagcaaaagcagctcatgaaaagcttgcttcagttagcaact 120

                                                                        
Query: 2854 ggtaacaaattaaaagcacttgcagcacagaaaactgtcaacatcattacaaatgtttcg 2913
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  ggtaacaaattaaaagcacttgcagcacagaaaactgtcaacatcattacaaatgtttcg 180

                                                                        
Query: 2914 atgagaccacgcagctcagtgaatgcttccgagtccaaagttgatgatggagatgttgtg 2973
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  atgagaccacgcagctcagtgaatgcttccgagtccaaagttgatgatggagatgttgtg 240

                                 
Query: 2974 gggttggcagccattatctga 2994
            |||||||||||||||||||||
Sbjct: 241  gggttggcagccattatctga 261