Miyakogusa Predicted Gene
- Lj1g3v4955350.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj1g3v4955350.1 tr|Q56VR6|Q56VR6_LOTJA Superoxide dismutase
[Cu-Zn] OS=Lotus japonicus GN=sodCc PE=2 SV=1,100,0,Cu,Zn superoxide
dismutase-like,Superoxide dismutase, copper/zinc binding domain; no
description,Sup,CUFF.33903.1
(462 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76148 UniRef100_Q56VR6 Cluster: Superoxide dismutase ... 916 0.0
gnl|LJGI|DC599548 UniRef100_Q56VR6 Cluster: Superoxide dismutase... 545 e-155
gnl|LJGI|AV408610 homologue to UniRef100_Q56VR6 Cluster: Superox... 313 5e-85
gnl|LJGI|DC594407 homologue to UniRef100_Q56VR6 Cluster: Superox... 295 1e-79
gnl|LJGI|GO024488 similar to UniRef100_Q9AR76 Cluster: Superoxid... 68 5e-11
>gnl|LJGI|TC76148 UniRef100_Q56VR6 Cluster: Superoxide dismutase [Cu-Zn]; n=1; Lotus
japonicus|Rep: Superoxide dismutase [Cu-Zn] - Lotus
japonicus, complete
Length = 848
Score = 916 bits (462), Expect = 0.0
Identities = 462/462 (100%)
Strand = Plus / Plus
Query: 1 atggtgaaggctgtggcagttcttggcagcagcgataatgtcaagggaactattaccttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 atggtgaaggctgtggcagttcttggcagcagcgataatgtcaagggaactattaccttc 141
Query: 61 agtcaggagggagatggcccaactaacgtaagcggaactatttccggtcttaagcccggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 142 agtcaggagggagatggcccaactaacgtaagcggaactatttccggtcttaagcccggt 201
Query: 121 ctccatggcttccatgtccatgccttgggtgacaccaccaatggctgcttgtcaactgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ctccatggcttccatgtccatgccttgggtgacaccaccaatggctgcttgtcaactgga 261
Query: 181 ccacatttcaatcctgcaggcaaggagcatggtgcccctgaggatgcgattcgtcatgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ccacatttcaatcctgcaggcaaggagcatggtgcccctgaggatgcgattcgtcatgct 321
Query: 241 ggtgatttaggaaatgtgactgtcggtgatgacggaaccacaagcttctctattactgac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ggtgatttaggaaatgtgactgtcggtgatgacggaaccacaagcttctctattactgac 381
Query: 301 agtcaaatccctctcactggaccaaactccatcataggaagggctgttgttgtccatgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 agtcaaatccctctcactggaccaaactccatcataggaagggctgttgttgtccatgct 441
Query: 361 gatcctgatgatctcgggaaaggtggccatgagcttagcaagactactggaaatgctggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gatcctgatgatctcgggaaaggtggccatgagcttagcaagactactggaaatgctggt 501
Query: 421 ggcagagtagcttgtggtattattggtttacaaggataaacc 462
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ggcagagtagcttgtggtattattggtttacaaggataaacc 543
>gnl|LJGI|DC599548 UniRef100_Q56VR6 Cluster: Superoxide dismutase [Cu-Zn]; n=1; Lotus
japonicus|Rep: Superoxide dismutase [Cu-Zn] - Lotus
japonicus, partial (61%)
Length = 408
Score = 545 bits (275), Expect = e-155
Identities = 275/275 (100%)
Strand = Plus / Plus
Query: 1 atggtgaaggctgtggcagttcttggcagcagcgataatgtcaagggaactattaccttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 atggtgaaggctgtggcagttcttggcagcagcgataatgtcaagggaactattaccttc 118
Query: 61 agtcaggagggagatggcccaactaacgtaagcggaactatttccggtcttaagcccggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 agtcaggagggagatggcccaactaacgtaagcggaactatttccggtcttaagcccggt 178
Query: 121 ctccatggcttccatgtccatgccttgggtgacaccaccaatggctgcttgtcaactgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 ctccatggcttccatgtccatgccttgggtgacaccaccaatggctgcttgtcaactgga 238
Query: 181 ccacatttcaatcctgcaggcaaggagcatggtgcccctgaggatgcgattcgtcatgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 ccacatttcaatcctgcaggcaaggagcatggtgcccctgaggatgcgattcgtcatgct 298
Query: 241 ggtgatttaggaaatgtgactgtcggtgatgacgg 275
|||||||||||||||||||||||||||||||||||
Sbjct: 299 ggtgatttaggaaatgtgactgtcggtgatgacgg 333
>gnl|LJGI|AV408610 homologue to UniRef100_Q56VR6 Cluster: Superoxide dismutase
[Cu-Zn]; n=1; Lotus japonicus|Rep: Superoxide dismutase
[Cu-Zn] - Lotus japonicus, partial (36%)
Length = 377
Score = 313 bits (158), Expect = 5e-85
Identities = 158/158 (100%)
Strand = Plus / Plus
Query: 305 aaatccctctcactggaccaaactccatcataggaagggctgttgttgtccatgctgatc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 aaatccctctcactggaccaaactccatcataggaagggctgttgttgtccatgctgatc 97
Query: 365 ctgatgatctcgggaaaggtggccatgagcttagcaagactactggaaatgctggtggca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 ctgatgatctcgggaaaggtggccatgagcttagcaagactactggaaatgctggtggca 157
Query: 425 gagtagcttgtggtattattggtttacaaggataaacc 462
||||||||||||||||||||||||||||||||||||||
Sbjct: 158 gagtagcttgtggtattattggtttacaaggataaacc 195
>gnl|LJGI|DC594407 homologue to UniRef100_Q56VR6 Cluster: Superoxide dismutase
[Cu-Zn]; n=1; Lotus japonicus|Rep: Superoxide dismutase
[Cu-Zn] - Lotus japonicus, partial (48%)
Length = 567
Score = 295 bits (149), Expect = 1e-79
Identities = 201/217 (92%), Gaps = 1/217 (0%)
Strand = Plus / Plus
Query: 1 atggtgaaggctgtggcagttcttggcagcagcgataatgtcaagggaactattaccttc 60
|||||||||||||| ||||||||||| ||||||||| ||||||| |||||||| | ||||
Sbjct: 186 atggtgaaggctgtagcagttcttggaagcagcgattatgtcaaaggaactatcaacttc 245
Query: 61 agtcaggagggagatggcccaactaacgtaagcggaactatttccggtcttaagcccggt 120
||||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||
Sbjct: 246 agtcaggagggagatggcccaactaccgtaactggaactatttccggtcttaagccc-gt 304
Query: 121 ctccatggcttccatgtccatgccttgggtgacaccaccaatggctgcttgtcaactgga 180
|| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||
Sbjct: 305 cttcatggcttccatgtccatgccttgggggacaccaccaatggctgcctgtcaactgga 364
Query: 181 ccacatttcaatcctgcaggcaaggagcatggtgccc 217
|||||||||||| |||||||||||| ||||||||||
Sbjct: 365 ccacatttcaattatgcaggcaaggatcatggtgccc 401
>gnl|LJGI|GO024488 similar to UniRef100_Q9AR76 Cluster: Superoxide dismutase [Cu-Zn];
n=1; Populus tremula x Populus tremuloides|Rep:
Superoxide dismutase [Cu-Zn] - Populus tremula x Populus
tremuloides, partial (98%)
Length = 708
Score = 67.9 bits (34), Expect = 5e-11
Identities = 70/82 (85%)
Strand = Plus / Plus
Query: 335 taggaagggctgttgttgtccatgctgatcctgatgatctcgggaaaggtggccatgagc 394
|||| |||||||||||||| |||||||||||||||||||| || | ||||| ||||| |
Sbjct: 401 tagggagggctgttgttgtacatgctgatcctgatgatctgggaaggggtgggcatgaac 460
Query: 395 ttagcaagactactggaaatgc 416
| ||||| || ||||| |||||
Sbjct: 461 tcagcaaaaccactgggaatgc 482